Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1420 ATGGCCTCGGCTCGTATCCTCATCATCTTTGTCATCGTAGCTGTTTCCGCTCCTATTATTTCTTCAACAGAATTCATTGTGGGTGATGACAATGGTTGGACCTTTGGCTTTGACTATCAAGCATGGGCTCACGGAAAGGAGTTCCATGTTGGAGATAAGCTTGTTTTCAACTACCCAGAAGGTAAACACAATGTCCTCAGAGTCAATGGCACCGGTTTCCAACAGTGTATGGCACCAGCTTCCACTCAAGCCTCTACCAATGGAAATGATGTCATTGTTCTTTCTTCCCCCGGAAAGAAATGGTACATCTGTGGTGTTGGCAAGCACTGTGAGGATGGTAACATGAAGCTTGCAATAACTGTGCAACCTCAATTTGGAATTGGGCCACCTTCTCCTACCCCAAGCCCAATTTCAGCTGCAACAGGAAGCTCACCTGTTTGTTCTGCTTGGATAGTGCTCATTTGTGCTTCCCTCGTAACGATTACGGGCTAG 492 0.4654 MASARILIIFVIVAVSAPIISSTEFIVGDDNGWTFGFDYQAWAHGKEFHVGDKLVFNYPEGKHNVLRVNGTGFQQCMAPASTQASTNGNDVIVLSSPGKKWYICGVGKHCEDGNMKLAITVQPQFGIGPPSPTPSPISAATGSSPVCSAWIVLICASLVTITG* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1420 163 CDD Phytocyanin 23 121 - -
Dod05g1420 163 PANTHER BLUE COPPER PROTEIN-LIKE 5 131 - -
Dod05g1420 163 Gene3D - 22 125 IPR008972 -
Dod05g1420 163 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Dod05g1420 163 SUPERFAMILY Cupredoxins 22 122 IPR008972 -
Dod05g1420 163 Pfam Plastocyanin-like domain 33 113 IPR003245 GO:0009055
Dod05g1420 163 PANTHER BLUE COPPER PROTEIN 5 131 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1420 Dod-Chr5 38543006 38544207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1420 1 145 Miscellaneous Gene Families AT2G32300 36.986 1.64e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1420 - - adu:107487489 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1420 05 38543006 38544207 Dod05g1420 05 38543006 38544207 ECH