Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1404 ATGGCTTTGTCTAGAGCTCTAGTTCTCTCTCTAATCAGCATTTCCTTGCTTCTAACCTTCACTTCAGCTGAGGATCCATTCGCTTTCTACAACTTTGAGGTCACCTACATCACTGCCTCTCCTCTTGGAGTTCCTCAACAGGTCATTGCTATCAACAACAAGTTTCCAGGTCCTACCATCAATGTGACCACAAACAACAATGTTGTTGTCAATGTCCGGAACAAACTCGATGAGAGCCTCCTCATTCATTGGTCTGGGATTCAGCAAAGAAGGAGTTCTTGGCAGGATGGTGTTCTTGGCACAAACTGCCCTATTCCTGCTAAGTGGAACTGGACTTACCAGTTTCAGGTGAAGGATCAGATTGGAAGCTTTTTCTACTTCCCTTCTCTTCATATGCAGAGAGCATCTGGTGGATTTGGTGGCTTCATCATTAACAACCGCCCCATCATTCCTATTCCCTTTGATACCCCACATGGGGACATTGTCATGTTTATTGGAGATTGGTACACGCGCAATCATACGGCTTTGAGGAAGGACCTTGATGCTGGAAAAGATCTTGGCATGCCGGATGGTGTTCTTATCAATGGGAAAGGTCCTTACAGATATAACGATACACTTGTTCCTGATGGCATTGATTTTGAGCAAATTGATGTCCAACCTGGGAAAACTTACCGAATTCGTGTACATAATGTTGGAGTATCAACAAGTCTGAATTTCAGGATCCAGAACCATAACTTACTGCTAGCAGAGACTGAGGGATCTTATACAGTTCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCCTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTACAGATTACTACATTGTTGCAAGTGCCAGGTTTGTGAATGAATCACTTTGGCAAAGAGTGACTGGAGTTGGAATCTTGCACTATACAAATTCCAAGGGGAAGGCAAAGGGCCCTCTCCCACCACCTCCAGATGACCAATATGACAAGACTTTCTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCGGCAAGTGGTGCGCGTCCTAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGACTGATATTTATGTATTAAAAAATAAGCCAAGGGAGAAGATTGATGGAAAGCAGCGAACAACACTCAGTGGCATCTCTTTTGTCAACCCTGCCACTCCTATCAGGCTTGCTGACCATTTCAAAGTGAAGGGAGTGTACAAGCTTGATTTCCCCAACAAGCCCATAACTGGACCACCTCAGGCCAAAACATCAGTAATCAATGGAACTTATAGAGGATTTATGGAAATTATACTGCAGAACAATGACACCAAGATGCATACCTATCACATGAGCGGATATGCATTTTTTGTTGTGGGGATGGATTTTGGTGACTGGTCTGAGAATAGCAGGGGCACATATAACAAATGGGATGGAATAGCTCGCACTACAACACAGGTTTATTCTGGAGCATGGACAGCAATTTTGGTCTCCCTTGACAATGTTGGGGTTTGGAACCTCAGAACAGAAAACCTTGATTCGTGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAATCCAGAGGCTACCAACAAGACTGAGCTGCCCATCCCAGACAATGCCCTTTACTGTGGTGCCCTTAGTAAATTGCAGAAGCCTCAAGATATTTCTTCTGCTCCATCAGTCAATGGGAATAGACTGAAGCTGTTGTTCACTTGGTTGATGTTTGCATGTGCCTTAATCCCCATTTTCTAG 1773 0.436 MALSRALVLSLISISLLLTFTSAEDPFAFYNFEVTYITASPLGVPQQVIAINNKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPAKWNWTYQFQVKDQIGSFFYFPSLHMQRASGGFGGFIINNRPIIPIPFDTPHGDIVMFIGDWYTRNHTALRKDLDAGKDLGMPDGVLINGKGPYRYNDTLVPDGIDFEQIDVQPGKTYRIRVHNVGVSTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESLWQRVTGVGILHYTNSKGKAKGPLPPPPDDQYDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDIYVLKNKPREKIDGKQRTTLSGISFVNPATPIRLADHFKVKGVYKLDFPNKPITGPPQAKTSVINGTYRGFMEIILQNNDTKMHTYHMSGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTTQVYSGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRVVNPEATNKTELPIPDNALYCGALSKLQKPQDISSAPSVNGNRLKLLFTWLMFACALIPIF* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1404 590 PANTHER MULTI-COPPER OXIDASE 12 562 IPR045087 -
Dod05g1404 590 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Dod05g1404 590 Gene3D - 158 351 IPR008972 -
Dod05g1404 590 Pfam Multicopper oxidase 161 313 IPR001117 -
Dod05g1404 590 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Dod05g1404 590 Gene3D - 19 146 IPR008972 -
Dod05g1404 590 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 12 562 - -
Dod05g1404 590 Gene3D - 364 561 IPR008972 -
Dod05g1404 590 SUPERFAMILY Cupredoxins 22 173 IPR008972 -
Dod05g1404 590 SUPERFAMILY Cupredoxins 378 551 IPR008972 -
Dod05g1404 590 Pfam Multicopper oxidase 400 533 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1404 Dod-Chr5 38346146 38351285 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1404 - - gmx:100788318 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1404 05 38346146 38351285 Dod05g1404 05 38346146 38351285 ECH