Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1403 ATGGGAGACCCCAAGGCATTATTACACTCTTCCTACACATCCCTCCCAAATGGGCCCCACACTCCTCCTGAAGCACAGAGAAAGGAGCTCCTTGTGGCTCTTTGTGGGTTTCTGGTTCTTGTTTCCTTGGTGGCATTCGGTGGCTACAGTGCCTCCAATGTAGATGGAACTCATCATGCACATGTTTCAATTCCAACGACGACAGTGTCGTCGTCTGAGAATTGTGGAGCAACGAAGCACCCCAAAACGGTGCCGTCGCGCCCCGTTTCGCGCGGCGTTTCTGAAGGGGTGTCGGAGAAGTCCAACAGGTTGTTGGGGGCGGAATCGGAAACGTATCCTTGGGACAACCGTATGCTGTCGTGGCAGAGAACAGCGTATCATTTCCAGCCCGAGAAGAACTGGATGAACGATCCTAACGGTCCTATGTACTACAAGGAATGGTATCACTTCTTCTACCAGTACAATCCAAATGGTGCAGTATGGGGTGACATAGTTTGGGGCCATGCAGTGTCAAAGGACATGATCCACTGGCTTCACCTCCCTCTAGCAATGGTGGCAGATCAATGGTATGACATGAATGGTGTGTGGACAGGCTCAGCAACCATCTTACCCGATGGCCAAGTCATCATGCTATACACTGGTTCAACCAACGAGTCAGTGCAGGTTCAGAACCTTGCTTACCCTGCTGACCTTTCTGACCCTCTCCTTATGGATTGGATCAAGTACCCTGGGAATCCAGTCCTGTACCCTCCACCAGGCATTGGTTCCAAGGACTTCCGCGACCCAACAACGGCTTGGCTCACCACTGATGGCAAGTGGCGCATCACCATAGGGTCCAAGATCAACAAAACTGGCATTGCCTTGGTTTATGACACTGAGGACTTCAAGAACTTTGAGCTCAAGGAGGGCGTGCTCCGTGCTGTGCCTGGCACCGGCATGTGGGAGTGTGTGGATTTCTATCCTGTGTCCAAGATGGCTGATAATGGATTGGATACCTCAAAGAATGGGGATGAGGTGAAGCATGTGGTTAAGGCGAGCCTGGATGATGATAGGCATGATTACTATGCAATTGGGACTTATGATGAGAAGAATGTGAAGTTCATACCAGATGAAGAGAAGAATGATGTTGGTATTGGACTGAGGTATGACTATGGTATATTCTATGCATCCAAGACATTTTATGATCAGCTTAAGGGAAGGAGAATTTTGTGGGGTTGGATTGAAGAGTCTGATAGTGAATATGCTGATCTGACCAAAGGTTGGGCATCAGTTCAGGCTGTTCCAAGAACAGTGAAGCTTGATAAGAGGACTGGAAGCAACTTACTCCAGTGGCCTGTTAAGGAGGTGGAGAGTTTGAGATTGCAAAGCGACGAGTTTAAAAAATTGAAGGCCAAGCCAGGGTCAGTGGTGTCACTAGACATTGGAACAGCCACACAGCTGGACATTGTTGCTGAGTTTGAGATAGACAAAGAAGCCGTTGAGAAAACAGCACAATCCAATGTGGAGTATGAGTGCAGCACCAGTGGTGGAGCTGCACACCGGGGTGCATTAGGACCTTTTGGTCTTCTGGTTTTAGCAGATGATGGACTTTCTGAATATACTCCTGTGTACTTTTATGTCACTAAAGGAAGCAATGGAAATCTAAAGACTTATTTCTGCTCAGATCAGTCCAGGTCCTCTGTGGCAACTGATTGTAATAAGCAAATCTTTGGGAGCGTTGTTCCAGTTCTTGCAGGCGAAAAGTTGTCCTTAAGGCTACTGGTGGACCATTCTATAGTTGAAAGCTTTGCACAAGGAGGAAGGACTTGTGTGACATCCCGGGTATACCCAACAAGGGCAATCTATGGAGCTGCTCGATTGTTCTTGTTCAACAATGCCACTGAGGCCACTGTGATAGCCTCACTCAATGTCTGGCAGATGAATTCTGCATTTATACGCCCATACCGACCTAACCAGAGTAGTTAG 1965 0.4814 MGDPKALLHSSYTSLPNGPHTPPEAQRKELLVALCGFLVLVSLVAFGGYSASNVDGTHHAHVSIPTTTVSSSENCGATKHPKTVPSRPVSRGVSEGVSEKSNRLLGAESETYPWDNRMLSWQRTAYHFQPEKNWMNDPNGPMYYKEWYHFFYQYNPNGAVWGDIVWGHAVSKDMIHWLHLPLAMVADQWYDMNGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADLSDPLLMDWIKYPGNPVLYPPPGIGSKDFRDPTTAWLTTDGKWRITIGSKINKTGIALVYDTEDFKNFELKEGVLRAVPGTGMWECVDFYPVSKMADNGLDTSKNGDEVKHVVKASLDDDRHDYYAIGTYDEKNVKFIPDEEKNDVGIGLRYDYGIFYASKTFYDQLKGRRILWGWIEESDSEYADLTKGWASVQAVPRTVKLDKRTGSNLLQWPVKEVESLRLQSDEFKKLKAKPGSVVSLDIGTATQLDIVAEFEIDKEAVEKTAQSNVEYECSTSGGAAHRGALGPFGLLVLADDGLSEYTPVYFYVTKGSNGNLKTYFCSDQSRSSVATDCNKQIFGSVVPVLAGEKLSLRLLVDHSIVESFAQGGRTCVTSRVYPTRAIYGAARLFLFNNATEATVIASLNVWQMNSAFIRPYRPNQSS* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1403 654 CDD GH32_Fruct1-like 133 433 - -
Dod05g1403 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 445 644 IPR013320 -
Dod05g1403 654 SMART glyco_32 127 600 IPR001362 GO:0004553|GO:0005975
Dod05g1403 654 Pfam Beta-fructofuranosidase, N-terminal domain 11 119 IPR021792 GO:0004564
Dod05g1403 654 MobiDBLite consensus disorder prediction 68 102 - -
Dod05g1403 654 MobiDBLite consensus disorder prediction 1 23 - -
Dod05g1403 654 Gene3D Glycosyl hydrolase domain; family 43 131 456 IPR023296 -
Dod05g1403 654 SUPERFAMILY Arabinanase/levansucrase/invertase 120 446 IPR023296 -
Dod05g1403 654 Pfam Glycosyl hydrolases family 32 C terminal 448 639 IPR013189 -
Dod05g1403 654 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 23 649 - -
Dod05g1403 654 ProSitePatterns Glycosyl hydrolases family 32 active site. 127 140 IPR018053 GO:0004553|GO:0005975
Dod05g1403 654 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 23 649 - -
Dod05g1403 654 Pfam Glycosyl hydrolases family 32 N-terminal domain 127 445 IPR013148 -
Dod05g1403 654 Gene3D - 457 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1403 Dod-Chr5 38331728 38337542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1403 61 648 Glycoside Hydrolase AT1G12240 65.662 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1403 K01193 - gmx:100798772 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1403 05 38331728 38337542 Dod05g1403 05 38331728 38337542 ECH
Dod02g0997 02 12656339 12660449 Dod05g1403 05 38331728 38337542 PCT