Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1396 ATGCGAGTGAAGGAAATGCATCCTTTGTGCTGCATCTCCCTGGAGAGTCCGGGGATCGGGGGGAGCCACTCGCCGGAGGCGGCGGATGCGGCGGCGCTGTCGAGGACGAGGAGTCTGCCCGCGAGTTTCGAGGCGGGCGGATCTGACGGTGGCCGGGGATCGGAGGAGACGGTGGCCGGAGTTCTTTACAAGTGGACCAATTACGGGAAAGGGTGGAGATCCCGGTGGTTCGTCCTCCGCAACGGCGTCCTCTCCTACGCCAAGATCCGGTGGCCGGACAACCTCAACCTCCTCCCTCCCCTTGACGACGTCCGCCTCATCGGCGAACTCTCCGCCAGCCGCCTCACCCGGATGGACCGCGACTCCGCCGCCAACACCATCCGCCGCAAGAACCACAAACCTCCCTCTTCTTCTGGCGTTGTCCATCTCAAGATCTCGTCATTTAGAGAGAGCAAATCAGATGATAGGAAGTTCTATATATTCACAGCAACGAAGACTCTCCATCTGAGGACAGATTCGAGGAAAGACCGTGTGGCGTGGATACAAGCTTTGGTGTCAACCCGTGGCTTGTACCCACTTAGACCACTCAGTGATCACCTCTCTCTTGCACCAAATCATGTGTCTGTGTCTACCGAGAGGCTCAAGAAACGTTTGCTTGAAGAGGGTACCAGTGAGAGCCTTGTGCAGGAGTGCGAGCAAATCATGATCGCTGAGTTCTCCGAATTACAAGGCCAACTTAAAATCCTGTGCCAGGACCGGTTGAATTTGCTTGATACAATAAGGCAGTTAGAGGCAGCTAATATTGAACCTGAGGCCTCTGCCATACACGGTGAATACCAATTAACAAAGAATGCGTTTTCAAGTCTAGGACGCGGAAAATATAGTGAATGCAGTACAACTGAATCATCTGATGATATTGAGAAGCAGGAACTGGAGGAAGTGTCCGAAGAAGATGAGATATCATATTATGATACTAGAGAGTATTTTACAGAACCTGGTTTTAGGTGTGGGTCACCAGGAGCTCTGGATCAAGTGAACAAGCCTAAAGGAGCTAACACACAATGCACTGATATGGACAACATTCATTTTCAGAAGGCGATCGATAATTATGGATACCCTCAGATTGCAAGGCGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGAGTTTGTCTTCCTGTGTACTTTAACGAGCCAATATCATCCCTTCAGAAATGTTTTGAGGACTTGGAGTACTCTTATCTTCTGGATCGAGCTTATGAGTATGGAAAATCAGGAAACAGTCTACTTCGGGCACTACATGTTGCTGCGTTTGCGGTTTCTGGATATGCATCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCTTTGTTAGGGGAAACTTATGAAGCCGATTATCCTGATAAGGGAATTCGCTTCTTTTCTGAGAAGGTCAGTCACCACCCTACTGTAGTTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGAAGGTCAATTCAACTTGATCCGGTGGGAGTTCTTACCCTTGAGTTTGACGATGGTGAAATATTTCAGTGGAGCAAGGTCACGACATCAATTTACAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGGAACATGGATATACGTGGCAATCGCCAGTATTCATGCAGACTCAAGTTCAAGGAACAGGCGATTCTGGACCGAAATCCTCGTCAGGTGCACGGATTTGTTGAAGATGTAACGGGGGAAAAAGTTGCCACGTTACATGGCAAGTGGGATGACAGCATATATTATGTTATTGGTGATGTGAACGTTAAAAAAGGTCTCAAGTTGTCAGATGCAACCTTGTTGTGGAAAAGGATTATGCCACCTCTTAATCTCACACGGTACAATTTGACATCATTTGCCATCACACTGAATGAGTTTACTCCAGGACTGAAGGAGAAGCTCCCGCCTACGGATTCCAGGCTGAGACCAGATCAGCGATACCTAGAGAATGGGGAATACGAGAGGGCTAATATGGAGAAACAAAGATTGGAGAAGAGGCAAAGAATGTCAAGGAAAATACAAGAAAGTGGTTGGAAGCCTAGGTGGTTCCACAAAGAAGGTGAAAACGGAACATTTCGATATGTTGGTGGGTATTGGGAAGCGAGAGCTCAAGGAAGATGGGATGGATGCCCAAATATATTTGGTGAATTTAATGAAGGCACTGTCGATCCTTTGGATGCATCTTGA 2313 0.4756 MRVKEMHPLCCISLESPGIGGSHSPEAADAAALSRTRSLPASFEAGGSDGGRGSEETVAGVLYKWTNYGKGWRSRWFVLRNGVLSYAKIRWPDNLNLLPPLDDVRLIGELSASRLTRMDRDSAANTIRRKNHKPPSSSGVVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLRPLSDHLSLAPNHVSVSTERLKKRLLEEGTSESLVQECEQIMIAEFSELQGQLKILCQDRLNLLDTIRQLEAANIEPEASAIHGEYQLTKNAFSSLGRGKYSECSTTESSDDIEKQELEEVSEEDEISYYDTREYFTEPGFRCGSPGALDQVNKPKGANTQCTDMDNIHFQKAIDNYGYPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALHVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTSIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQAILDRNPRQVHGFVEDVTGEKVATLHGKWDDSIYYVIGDVNVKKGLKLSDATLLWKRIMPPLNLTRYNLTSFAITLNEFTPGLKEKLPPTDSRLRPDQRYLENGEYERANMEKQRLEKRQRMSRKIQESGWKPRWFHKEGENGTFRYVGGYWEARAQGRWDGCPNIFGEFNEGTVDPLDAS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1396 770 Gene3D - 478 648 - -
Dod05g1396 770 Pfam Oxysterol-binding protein 392 744 IPR000648 GO:0008289
Dod05g1396 770 Gene3D - 52 189 IPR011993 -
Dod05g1396 770 Pfam Pleckstrin homology domain 60 184 - -
Dod05g1396 770 SMART PH_update 56 191 IPR001849 -
Dod05g1396 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 761 - -
Dod05g1396 770 ProSiteProfiles PH domain profile. 55 189 IPR001849 -
Dod05g1396 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 761 IPR000648 GO:0008289
Dod05g1396 770 Gene3D - 687 746 - -
Dod05g1396 770 SUPERFAMILY Oxysterol-binding protein-like 387 761 IPR037239 -
Dod05g1396 770 SUPERFAMILY PH domain-like 56 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1396 Dod-Chr5 38164825 38180699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1396 K20456 - gmx:100793692 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1396 05 38164825 38180699 Dod05g1396 05 38164825 38180699 ECH
Dod02g0989 02 12507779 12516021 Dod05g1396 05 38164825 38180699 PCT