Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1394 ATGGATTCTTCTAGATCTTCAACTCTTGCTCTCTTTCTCTCCATCAATTTGCTCTTCTTTGTCCTGGCAAGTGGATGCTTCACTTGTACACAGCCTAAGCCTAAGCCAAACCCCTTCCCTTTCCCAAACCCTAGTCCAGCCACCAATAAGGGATGCCCCAGAGATGCATTGAAGTTGGGAGTTTGTGCAAAGGTTCTTAATGGACCAATTGGTGCAGTGGTGGGATCACCACCTGACCACCCGTGTTGCTCAGTGCTGGAAGGGCTTATTGACCTTGAAGTTGCCGTTTGCCTTTGCACTGCCATCAAAGCCAACATTCTTGGCATTAACCTTAACATCCCCATTTCACTGAGCTTGCTCCTTAACGCCTGCGAGAAGACCCCACCCTCTGACTTCCAGTGCTCTTAA 408 0.4877 MDSSRSSTLALFLSINLLFFVLASGCFTCTQPKPKPNPFPFPNPSPATNKGCPRDALKLGVCAKVLNGPIGAVVGSPPDHPCCSVLEGLIDLEVAVCLCTAIKANILGINLNIPISLSLLLNACEKTPPSDFQCS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1394 135 Pfam Hydrophobic seed protein 52 135 IPR027923 -
Dod05g1394 135 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Dod05g1394 135 Gene3D - 51 135 IPR036312 -
Dod05g1394 135 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 134 IPR036312 -
Dod05g1394 135 CDD HPS_like 52 134 IPR027923 -
Dod05g1394 135 SMART aai_6 52 134 IPR016140 -
Dod05g1394 135 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 134 - -
Dod05g1394 135 PANTHER - 6 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1394 Dod-Chr5 38105352 38105759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1394 43 134 Acyl Lipid Metabolism Gene Families AT4G22490 36.559 3.81e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1394 - - gmx:100527818 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1394 05 38105352 38105759 Dod05g1394 05 38105352 38105759 ECH