Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1391 ATGGCTTCCAAAACTTGTTCCTCTTCCCTTGCTCTTTTCCTCACACTCAACCTTCTCTTCTTTGCACTTGTCTCTGCTTGCGGGTCATGCCCTGGTCCCAACCCAAGGCCAAGGCCACGACCAAGGCCAAGGCCAAGCCCAAACCCTTCAGGTGGCTCAAGCCCCGGGAGTGGCTCTAGCCCTGGTGGTTCTAGCCCTTCTGGCGGTGGCTCCACCCCCTCAGGTGGAAACACCCCTTCAGGTGGAAACACCCCTTCTGGTGGCAATAACCCTTCAGGTGCCTCATGCCCACGTGACGCACTCAAACTTGGTGTGTGCGCCAATGTGCTAAACGGGTTGCTGAATGTGACTTTGGGTCAGCCACCAGTAACCCCTTGCTGCTCCCTCCTTAGTGGCCTTGTTGATCTTGAAGCCGCAATTTGCCTCTGCACTGCACTCAGAGCAAGCATTCTGGGCATCAACGTCAACCTTCCCATCTCACTCAGCTTGCTTCTCAATGTCTGCTCAAGGAATGTCCCACGTAACTTCCAATGTCCCTAA 540 0.55 MASKTCSSSLALFLTLNLLFFALVSACGSCPGPNPRPRPRPRPRPSPNPSGGSSPGSGSSPGGSSPSGGGSTPSGGNTPSGGNTPSGGNNPSGASCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLSGLVDLEAAICLCTALRASILGINVNLPISLSLLLNVCSRNVPRNFQCP* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1391 179 Gene3D - 95 179 IPR036312 -
Dod05g1391 179 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 98 179 IPR036312 -
Dod05g1391 179 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Dod05g1391 179 SMART aai_6 96 178 IPR016140 -
Dod05g1391 179 Pfam Hydrophobic seed protein 96 179 IPR027923 -
Dod05g1391 179 MobiDBLite consensus disorder prediction 32 50 - -
Dod05g1391 179 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 8 50 - -
Dod05g1391 179 MobiDBLite consensus disorder prediction 31 95 - -
Dod05g1391 179 MobiDBLite consensus disorder prediction 51 93 - -
Dod05g1391 179 CDD HPS_like 93 178 IPR027923 -
Dod05g1391 179 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 84 179 - -
Dod05g1391 179 PANTHER - 8 50 - -
Dod05g1391 179 PANTHER - 84 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1391 Dod-Chr5 38049784 38050763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1391 95 179 Acyl Lipid Metabolism Gene Families AT4G22490 44.828 5.51e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1391 - - gmx:100798361 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1391 05 38049784 38050763 Dod05g1391 05 38049784 38050763 ECH