Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1388 ATGGCTTCCAAGGCTGCTATTCTCCTTGCCCTCAACCTCCTCTTCTTCACAGTGGTGAGCTCCAACTATGTCCCATGCCCACCACCACCACACAAGGGTCACAAACACCCACCACCAGTCCCACAGCCACCTTCCACTAAGCAACCCACTTGCCCCAGAGACACCCTGAAGCTTGGTGTGTGCGCTGATGTGTTGGGCTTGGTGAATGTGCAGCTTGGCAAGCCACCAAAGACCCCATGCTGCTCCCTCATTGATGGCCTTGTTGATCTTGAAGCCGCAGTGTGCCTTTGCACTGCTCTCAAGGCCAACTTGCTCGGAATTAACCTTAACATTCCCATCAGTTTGAGCTTGATCCTCAACTACTGTGGAAAGGGGGTCCCCAAGGGATTCGTCTGCGCTTAA 402 0.5373 MASKAAILLALNLLFFTVVSSNYVPCPPPPHKGHKHPPPVPQPPSTKQPTCPRDTLKLGVCADVLGLVNVQLGKPPKTPCCSLIDGLVDLEAAVCLCTALKANLLGINLNIPISLSLILNYCGKGVPKGFVCA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1388 133 Gene3D - 47 133 IPR036312 -
Dod05g1388 133 Pfam Hydrophobic seed protein 50 133 IPR027923 -
Dod05g1388 133 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 133 - -
Dod05g1388 133 CDD HPS_like 49 132 IPR027923 -
Dod05g1388 133 SMART aai_6 51 132 IPR016140 -
Dod05g1388 133 MobiDBLite consensus disorder prediction 30 48 - -
Dod05g1388 133 PANTHER - 2 133 - -
Dod05g1388 133 MobiDBLite consensus disorder prediction 30 49 - -
Dod05g1388 133 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 132 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1388 Dod-Chr5 37988231 37988999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1388 44 132 Acyl Lipid Metabolism Gene Families AT4G22490 35.955 1.46e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1388 - - gmx:100500229 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1388 05 37988231 37988999 Dod05g1388 05 37988231 37988999 ECH