Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1382 ATGGGAACTCGAACCAATTTCTACAAGAACCCATCCATCTCCTACAACAAACACTTGAGCCTCTCCTCCGTTCTTCAGAACCTCCAAGCATATAACGCCGCCACTGGCAATGGTCCTCCCGCCGATCAACCGCCTCCGCCTCCCGCCGCCGCCTCCGACGACAGAACTCGCTCCCTCAAACGCCGCCGGGGTCCCAGGCCACCGAAAGAAGCGCAACAGGATGAGGATGGCCCTTCCTCCATGTCACACCTCGATTACATCGAAAAGAGAAGGAAAGAAGTTGATTCTTCTCGGAATTGCAAACGTGTTGAATTGATGGAAGATGTATTGAGAAACCCTAATTCTGCTGTAGCCTTGGTGGATTATGCAAGTGATGATTCTGATGAAGATCATGCAAAAGAATTTGATGGAATCAAAAGCAGAAATGAGCAGCGTTTTCCTGTTTCTGGAGAACCTATTTGTGTTATATGTGGCAGATATGGGGAGTACATATGCAATGAGACAGATGATGATCTCTGTAGCATGGAGTGCAAAAATGAACTTCTGCAAAGTCTTAAATTGAATGAGGGAGCCTCCCACAACGAAATCAGAGATTTCTCTTCCTCTGGAATTAGTGATGCCTTACCAGTTCCTGTGTTTAGTGAGGATAGCTGGGATTATAATAGGCATCGCTGGACCAAAAAGAGATCTAGTCTTTCAACTTATGAATGTTGGAAATGTCATCGACCTGGGCACCTAGCTGAAGATTGTCTGGTAACGAGTTGCAGTCAGATCACTGCAGCAAGTAATAGATCTAGCTCCATTCCTAAGGATCTTCTTCGACTGTATAGAAGATGCCACCAGATTGGTAAAGACTTATCGGCTGCAAACTGTAATGTTTGCCGCAGCTCATCAAATTTGGCAACATGCCTTGATTGTAGTATTGTCCTTTGTGATGGGGCAGGTCACTTGGATGAGCATATAAGAACACATCCATCTCATCAAAAATATTACTCACACAAGCTTAAACGTCTGGTAAAATGTTGCAAGTCAACATGCAAGGCCGTCGATATCAAGGATCTCTTGATTTGCCACTACTGCTTTGATAAAGCTTTTGAAAAGTTCTATGACATGTATACTGCAACATGGAAAGGAGCTGGGCTTTCAATTATATGGGGTTCTATATGCTGTGAAGATCACTTCACCTGGCACAGGATGAATTGTTTGAACGCAGATGTGGAAGAAAGTGCATATATTGTGAAAAGAGACAGCCATAAAGGCAAACGTAGGCAACTTAGTGACTTCATTTTTGGATGA 1296 0.4406 MGTRTNFYKNPSISYNKHLSLSSVLQNLQAYNAATGNGPPADQPPPPPAAASDDRTRSLKRRRGPRPPKEAQQDEDGPSSMSHLDYIEKRRKEVDSSRNCKRVELMEDVLRNPNSAVALVDYASDDSDEDHAKEFDGIKSRNEQRFPVSGEPICVICGRYGEYICNETDDDLCSMECKNELLQSLKLNEGASHNEIRDFSSSGISDALPVPVFSEDSWDYNRHRWTKKRSSLSTYECWKCHRPGHLAEDCLVTSCSQITAASNRSSSIPKDLLRLYRRCHQIGKDLSAANCNVCRSSSNLATCLDCSIVLCDGAGHLDEHIRTHPSHQKYYSHKLKRLVKCCKSTCKAVDIKDLLICHYCFDKAFEKFYDMYTATWKGAGLSIIWGSICCEDHFTWHRMNCLNADVEESAYIVKRDSHKGKRRQLSDFIFG* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1382 431 SUPERFAMILY Retrovirus zinc finger-like domains 220 250 IPR036875 GO:0003676|GO:0008270
Dod05g1382 431 Gene3D - 226 271 - -
Dod05g1382 431 Gene3D - 135 192 - -
Dod05g1382 431 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 430 - -
Dod05g1382 431 MobiDBLite consensus disorder prediction 32 83 - -
Dod05g1382 431 Pfam HIT zinc finger 152 178 IPR007529 -
Dod05g1382 431 MobiDBLite consensus disorder prediction 54 73 - -
Dod05g1382 431 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 430 - -
Dod05g1382 431 ProSiteProfiles Zinc finger CCHC-type profile. 237 250 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1382 - - gmx:100814892 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1382 05 37922520 37929355 Dod05g1382 05 37922520 37929355 ECH