Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1379 ATGCAAGCGCAAAAAGAAGCTCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAGAGTGTAAAAACTATCGATGGTGCCACCCCAAAGGATATCACTGCAGAAATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGAGCAAATTGAGAGTGGTGTATGTTTCTCCGCCTCAACCGCCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCACCTAGAGGTTCTGTTTCAGAAAATGGGAATGTCGGTGGTACTGAGTACACTCAAGCAGCAAGAGGATTTACTGACAGATCAGAGGGTCAAGACAAATCTGCAGAGGCAAGGGCCCTTATCTCAAGGCTGACTGAAGAGAAGAATAATGCAATTCAACAAAGTAACAAGCTTCGTCAAGAACTGGAGCTGCTGAAGCGCAAAGGCAACAAAAATCGTGGTGGAGTCCCGTTTGTCATTGTCATATTAATTGGCTTGCTTGGCATAATCTTGGGGTATCTCTTGAAGAGGACCTAA 516 0.4554 MQAQKEAPPDMQCKDKFLLQSVKTIDGATPKDITAEMFNKEAGHVVEESKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNVGGTEYTQAARGFTDRSEGQDKSAEARALISRLTEEKNNAIQQSNKLRQELELLKRKGNKNRGGVPFVIVILIGLLGIILGYLLKRT* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1379 171 MobiDBLite consensus disorder prediction 73 98 - -
Dod05g1379 171 Gene3D Immunoglobulins 1 60 IPR013783 -
Dod05g1379 171 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 56 IPR000535 -
Dod05g1379 171 SUPERFAMILY PapD-like 1 71 IPR008962 -
Dod05g1379 171 Coils Coil 107 141 - -
Dod05g1379 171 MobiDBLite consensus disorder prediction 54 110 - -
Dod05g1379 171 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 169 IPR016763 GO:0005789
Dod05g1379 171 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1379 Dod-Chr5 37909503 37912257 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1379 - - gmx:100527687 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1379 05 37909503 37912257 Dod05g1379 05 37909503 37912257 ECH
Dod02g0983 02 12437108 12440829 Dod05g1379 05 37909503 37912257 PCT
Dod05g1379 05 37909503 37912257 Dod02g0930 02 11866549 11869651 PCT