Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1306 ATGTCTAGCATTCACACTGCAACCAACAGCATGACAATGTTGTCCAGTTATCTGCACTCCCTCTCTCAAACTCCTCACAGGCTTAGGAAAAGGATGCTAGCCACTTGGACCCCAGACCAGGAATTCAACCAAGTGAGGCAGAGGTCTGGGGCAGACATGAAGAGGAAGCTCATGTGGTATGATCTGGTGGCTCTTGGAGTGGGAGGAATGCTTGGTGTTGGAGTGTTTGTCACTACTGGCTCTGTAGCCCTTCATCACTCTGGTCCCTCAGTCTTCATTTCCTATATCATAGCAGGAATATCAGCCCTTCTCTCCTCTTTGTGTTACACTGAATTTGCTGTTCAAGTCCCAGTTGCTGGTGGAGCTTTCAGTTATTTACGATTAACCTTTGGAGAATTCATGGGATATTTTGCTGGGGCAAATATACTGATGGAGTATGTCTTCTCAAACGCTGCCGTAGCAAGGAGCTTCACAGAATATTTGAGCTTTGCTTTTGGACAAAATGATCCAAATGTGTGGAGATTGGAAGTCCATGGAATGCCAAAGGATTATAACATGTTGGATTTTCCAGCAGTGGCTCTAATTCTTCTTCTCACTCTCTGCTTGTGTCATAGTACTAAGGAAAGCTCCATATTGAACCTCGTTATGACAGTCTTCCATGTGATTTTCTTTGGATTCGTCATAGTCGCTGGTTATTGCAATGGAAGTGCCAAAAACTTGGTTAGTCCAAAAGGATTTGCTCCTTTTGGTGTTAGAGGTGTTCTTGATGGAGCAGCAATAGTCTACTTCAGTTATATAGGCTATGACTCAGCTTCAACCATGGCAGAGGAGGTCAAAGATCCCTCTAAGAGCCTTCCCATTGGAATTGTGGGTTCAGTTGTCATAACCACTTTGCTTTATTGCCTAATGGCTCTGTCGTTGTGCATGATGGTTCCTTACAACATGATATCAAAAAATGCGTCATACTCAATGGCTTTCCTTAAAATTGGCTGGAGTTGGGCGAGCAACCTTGTTGGGGCAGGTGCAAGTTTGGGGATTGTGGCTTCTCTCTTGGTTGCCATGTTAGGCCAAGCAAGATACCTTTGTGTTATAGGAAGGGCAAGGTTGGTGCCGTCTTGGTTAGCCAAAGTACATCCTTCAACAGGCACCCCATTGAACGCAACACTATTTTTGGGGCTTTGCACAGCATCTATTGCGCTTTTCACGGAGCTTGACATTATAATTGAGTTGGTCAGCATTGGCACGCTCTTGGTGTTCTACCTCGTAGCCAATGCCCTTATCTACCGTAGATATGCAATCACTAGCAGCAACAATACCCCACCTTTGTACACACTCTTGTTCCTTTTCCTCCTCTCTCTAACCTCACTATGCTTCTCCCTAGCGTGGAAATTCAAGCAGCAATGGTGGGGTCTACTACTGTTCGGTGGGCTCTTGATCACAATCACTGCCTTCTTCCAACACATGGTGGTGCATAAGCACAACAGTGCCCTCCCCCATTGGTCGGTGCCATTCATGCCATGGCCACCAGCCATGTCAATCTTCCTCAATGTTTTCCTCATGACCACGCTCAAGCTCCTCTCTTTCCAAAGGTTCGCCATATGGGCATGCCTCATTACCATCTTCTACTTGCTCTATGGTGTTCACTCCACTTACCAAGCAGAGGAGATTGAGATGGGTGGTGTTAATCAAGTGAATGACCCCAATTTGCAAGCTAAGGTTGAAATTCAAGTGCATTAG 1737 0.4565 MSSIHTATNSMTMLSSYLHSLSQTPHRLRKRMLATWTPDQEFNQVRQRSGADMKRKLMWYDLVALGVGGMLGVGVFVTTGSVALHHSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFMGYFAGANILMEYVFSNAAVARSFTEYLSFAFGQNDPNVWRLEVHGMPKDYNMLDFPAVALILLLTLCLCHSTKESSILNLVMTVFHVIFFGFVIVAGYCNGSAKNLVSPKGFAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEVKDPSKSLPIGIVGSVVITTLLYCLMALSLCMMVPYNMISKNASYSMAFLKIGWSWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATLFLGLCTASIALFTELDIIIELVSIGTLLVFYLVANALIYRRYAITSSNNTPPLYTLLFLFLLSLTSLCFSLAWKFKQQWWGLLLFGGLLITITAFFQHMVVHKHNSALPHWSVPFMPWPPAMSIFLNVFLMTTLKLLSFQRFAIWACLITIFYLLYGVHSTYQAEEIEMGGVNQVNDPNLQAKVEIQVH* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1306 578 Pfam Amino acid permease 59 462 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dod05g1306 578 Gene3D Amino acid/polyamine transporter I 52 496 - -
Dod05g1306 578 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 14 563 - -
Dod05g1306 578 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 14 563 - -
Dod05g1306 578 Pfam C-terminus of AA_permease 500 549 IPR029485 -
Dod05g1306 578 PIRSF AA_transporter 427 570 - -
Dod05g1306 578 PIRSF AA_transporter 34 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1306 Dod-Chr5 36680747 36687213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1306 144 554 Organic Solute Cotransporters AT3G10600 51.294 2.45e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1306 - - gmx:100790787 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0921 02 11804492 11807473 Dod05g1306 05 36680747 36687213 PCT