Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1295 ATGCGAGACTGTAAACGGCTTGTAAAAGAGTTTGACAAAGAAATCAAAGCCTTGGAGGGTAACTTTGATAGAGAAACCAACAAAATGTTGAATGAGAAAAAGCAATCGATGATCAAAGAGTTGAATTCATATGTTGCTTTGAAAAAGCAATATGCTACAAATATTGAGAATAAGAAAATTGAGCTGTTTCAGGGGCCCAATGAAGGTTTTGCGGAAGAAAATGTCTTGCTAGCTTCCTCAATGACAAATCAACAGCTAATGGATAATGGGAATCGGATGATGGATGAGACAGATCAAGCCATTGAGAGGGGAAAGAAGGTTGTTCAAGAGACTATAAATGTTGGTACAGAGACTGCAGCAGCTCTTAAGGCTCAGACAGAACAAATGAGCAGAATTGTCAATGAGCTGGATTCTATCCACTTCTCTATAAAGAAAGCCTCTAAGTTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGGATTACTTTTCCTTATTGTCGTTGGAGTAATTGCTATCATTATTGTAAAGCTTGTGCACCCAAACAACAAGGACATCCGCGACATTCCAGGATTAGCTCCTCCAGCAATGAACCGAAAACTGCTTTGGAGTCACAGTTAA 633 0.3965 MRDCKRLVKEFDKEIKALEGNFDRETNKMLNEKKQSMIKELNSYVALKKQYATNIENKKIELFQGPNEGFAEENVLLASSMTNQQLMDNGNRMMDETDQAIERGKKVVQETINVGTETAAALKAQTEQMSRIVNELDSIHFSIKKASKLVKEIGRQVATDKCIMGLLFLIVVGVIAIIIVKLVHPNNKDIRDIPGLAPPAMNRKLLWSHS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1295 210 Pfam Sec20 100 174 IPR005606 GO:0005484|GO:0006890
Dod05g1295 210 Coils Coil 1 35 - -
Dod05g1295 210 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 199 - -
Dod05g1295 210 Gene3D - 82 161 - -
Dod05g1295 210 SMART tSNARE_6 86 153 IPR000727 -
Dod05g1295 210 PANTHER NOVEL PLANT SNARE 11 1 199 - -
Dod05g1295 210 SUPERFAMILY SNARE fusion complex 81 154 - -
Dod05g1295 210 CDD SNARE_SNAP25N_23N_29N_SEC9N 88 152 IPR044766 GO:0005484|GO:0031201
Dod05g1295 210 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 91 153 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1295 Dod-Chr5 36500308 36505170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1295 K08494 - gmx:100786429 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1295 05 36500308 36505170 Dod05g1295 05 36500308 36505170 ECH