Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1291 ATGGCCTTAACACTTCGTTCTTCAATCTCTTTTATAAATCATAAAGAAACCAAATTCTTCAAAACTTCTGACGATGCCTTCGCTACAGTTACCTTTGCAAGAATCAACCCATCTTTCTGCATCCGAGCAAAGAGTTCCATGCAGGAAGCATGTCACACATGCCAGAGAGACGAGAAATGGGAGAAGGTGCATGCACCATCGGTTGCTCATGCTCATGAACACGATGATTCAAAGAGGGTGCCTGTGTTTGTGATGCTGCCGCTAGACACGGTGGCAATGGGGGGAAGCTTGAACAAGCCCAGAGCGATGAATGCTAGCTTGATGGCCCTGAAGAGTGCAGGAGTTGAGGGGGTAATGGTGGATGCATGGTGGGGTTTGGTAGAGAAAGATGGCCCTCTGAGGTACAACTGGGATGCCTATGCTGAGCTTGTGCGCATGGTACAAGTGCATGGCCTTAAGCTTCAAGTTGTCATGTCTTTCCATCAGTGTGGAGGAAATGTAGGAGACACATGCTGCATTCCTCTACCCCCATGGGTGCTGGAAGAAATCAGCAAGAACCCTGACCTGGTTTACACAGACAGATCAGGGAGGAGGAATCCCGAGTACATCTCCTTAGGCTGTGATTCAGTGCCTGTTCTAAGAGGAAGGACTCCCCTCCAAGTGTACTCCGACTACATGAGAAGCTTCCGTGACACATTTAGAGATTACTTAGGCAGTGTTATCGTGGAAATACAAGTGGGGATGGGTCCATGTGGGGAGCTGAGATATCCATCTTATCCGGAAAGCAATGGAACTTGGAGGTTTCCTGGAATTGGAGAATTCCAAGGCTATGACAAGTATATGAAAGCATCCTTGGCAGCAGCGGCCGAGGCCATTGGAAAGAAAGAATGGGGGAGAAGTGGTCCCCATGACTCCGGCCAGTACAATCAATTTCCAGAGGATACTGGATTTTTCAGGAGGGAAGGAACATGGAACTCTGAATATGGCCAGTTCTTTCTGGAATGGTACTCCAGCAAATTGCTGGAACATGGTGAGAGGATCCTTGCATCTGCCAAAGAAATATTCCAAACATCTGGGGCGAAACTATCTGGAAAAATTGCTGGAATTCACTGGCATTACAGAGCAAGGTCACATGCAGCTGAATTAACTGCCGGCTATTACAATACACGGTTCAATGATGGTTATCTACCAATAGCAAAAATGCTGGCAAAACATGGAGTTGTCTTCAATTTCACCTGCATGGAAATGAAAGACAGAGAGCAGCCTGGCCATTGCTAA 1278 0.4718 MALTLRSSISFINHKETKFFKTSDDAFATVTFARINPSFCIRAKSSMQEACHTCQRDEKWEKVHAPSVAHAHEHDDSKRVPVFVMLPLDTVAMGGSLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLRYNWDAYAELVRMVQVHGLKLQVVMSFHQCGGNVGDTCCIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSVPVLRGRTPLQVYSDYMRSFRDTFRDYLGSVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQGYDKYMKASLAAAAEAIGKKEWGRSGPHDSGQYNQFPEDTGFFRREGTWNSEYGQFFLEWYSSKLLEHGERILASAKEIFQTSGAKLSGKIAGIHWHYRARSHAAELTAGYYNTRFNDGYLPIAKMLAKHGVVFNFTCMEMKDREQPGHC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1291 425 ProSitePatterns Beta-amylase active site 1. 161 169 IPR018238 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 249 271 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 324 343 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 135 153 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 360 376 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 114 128 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 157 178 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 377 388 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 395 418 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 PANTHER - 1 425 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 Gene3D Glycosidases 69 425 - -
Dod05g1291 425 PANTHER BETA-AMYLASE 1 425 - -
Dod05g1291 425 Pfam Glycosyl hydrolase family 14 83 424 IPR001554 GO:0000272|GO:0016161
Dod05g1291 425 SUPERFAMILY (Trans)glycosidases 78 425 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1291 Dod-Chr5 36477999 36480297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1291 1 425 Glycoside Hydrolase AT4G17090 72.581 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1291 K01177 - gmx:100818063 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1291 05 36477999 36480297 Dod05g1291 05 36477999 36480297 ECH