Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1286 ATGGCGGAATCGGTGGAGCTGCCGAGTCGGTTGGCGATCCTGCCTTTCAGGAACAAAGTCCTCTTACCCGGCGCCATCATCAGAATCCGCTGCACTTCCCCTACCAGTGTGAAGCTGGTGGAGCAAGAACTTTGGCAGCGAGAAGAGAAGGGTTTGATTGGCATCCTGCCAGTGCGTGATGCTGCTGAAATTAAGCCAGTGGGTCCCACTGTATCTCAAGGTGCTGGAACTGATTCTCTCGACCAAAGCGCAAAAGTTCAAGGTGGTTCATCGGATTCAAATAAGCTTGATACGAAAAGACAGAATGATGTTGTTCATTGGCATACCAGGGGGGTAGCTGCTCGAGCATTACATTTGTCAAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACCTACATAGTTGTTCTTGAAGGCTTGTGCAGATTTAGTGTCCAGGAACTAAGCACAAGAGGAACGTACCATACTGCAAGGATATCTTCCCTTGAGATGAGTAAGACTGAGATGGAACAAGTGGAGCAAGACCCAGATTTCATAATGCTCTCTCGCCAATTTAAAGCAACTGCCATGGAGCTTATTTCTGCCCTGGAACTGGTTAACATCTTGTTACAGAAGCAAAAAACTGGTGGAAGGACAAAAGTTCTTTTGGATACCGTTCCAATTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAACAGCTATCTATGTTGGATTCAGTTGACCCCAAAGTGAGGCTTTCAAAAGCAACAGAGTTAGTTGATAGGCACTTACAGTCAATCCGTGTTGCGGAGAAAATTTCACAGAAGGTTGAAGGACAATTGTCGAAATCTCAAAAAGAATTTCTTTTGCGCCAGCAGATGAGGGCTATAAAAGAGGAGCTTGGTGATAACGATGATGATGAGGATGACCTGGCTGCCTTGGAAAGAAAGATGCAAAGTGCAGGAATGCCACAGAATATATGGAAGCATGCACACCGAGAGTTGAGGAGGCTAAAAAAAATGCAGCCTCAGCAACCTGGGTATAGCAGTTCACGGGTTTACCTAGAGCTTCTTGCTGATCTGCCATGGCAGAAGGCAAGTGAAGAGCTTGAACTGGACTTAAAAGCTGCACAGAAACGACTAGACAGTGACCACTATGGTTTAGTGAAGGTCAAGCAACGGATAATTGAATACCTAGCAGTTCGCAAGCTTAAACCAGATGCAAGGGGTCCTGTGTTGTGCTTTGTTGGACCACCAGGTGTTGGAAAAACATCGTTGGCATCTTCTATTGCTGCTGCTTTGGGCAGAAAATTTGTGCGCATCTCCCTTGGTGGAGTCAAGGATGAGGCTGATATTAGAGGACATAGGAGAACATATGTTGGAAGCATGCCCGGGCGGCTTATAGATGGATTAAAGAGAGTAGCTGTCTGCAATCCTGTTATGTTGCTGGATGAGGTTGACAAGACAGGTTCTGATGTTCGTGGAGATCCAGCTTCAGCGTTGCTAGAAGTTCTTGATCCTGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATTTGATCTATCCAAGGTAATTTTTGTGGCTACGGCAAATAGGATTCAGCCTATTCCTCCCCCACTTCGTGATAGGATGGAAGTAATTGAGCTTCCTGGATACACACCTGAGGAAAAGCTCCAAATTGCCATGCATCATTTGATTCCAAGAGTTTTGGACCAGCATGGATTGAGTTCTGAGTTTCTTCAGATTCCAGAGGGCATGGTAAAACTTGTCATTCAGAGATATACTAGGGAAGCTGGTGTGCGAAATTTGGAGAGGAATCTAGCTGCCCTGGCTCGTGCTGCTGCAGTAAAAGTTGCAGAGCAAGAACAGGTTGTTCCACTAAACAAAGGGATGCAGGGACTTGCTGCACCACTTATGGAAAACAGACTTGCTGACGGCACTGAAGTTGAAATGGAAGTGATACCGATGGGTGTCAATAGTCGGGACATCTCAAACACATTCAGGATTGCCTCTCCCTTGGTTGTTGATGAAGCTATGCTTGAACAAGTGCTTGGGCCTCCTAGATTTGATGATGGGGAAGCTGCAGAACGAGTTGCAGCCCCTGGTGTTTCTGTTGGTTTGGTTTGGACAGCTTTTGGGGGAGAAGTTCAGTTTGTGGAGGCTACAGCAATGGTAGGGAATGGTGAACTGCACCTCACTGGGCAGCTTGGTGATGTCATCAAAGAATCAGCTCAGATTGCACTAACATGGGTAAGGGCAAGGGCAACTGATTTTAGGCTGGCAGTGGCAGATGGTGTTAATCTTTTGGAGGGCCGCGATGTACATATACATTTTCCTGCTGGAGCTGTACCTAAAGATGGACCTTCAGCAGGTGTGACTTTGGTCACAGCATTGGTATCACTATTCAGTCAGAAAAGAGTGAGATCAGATACAGCTATGACTGGAGAAATGACATTGAGGGGCCTTGTACTACCTGTTGGTGGTGTCAAGGATAAGGTATTAGCTGCACATCGTTATGGTATTAAGAGAGTTATCCTGCCTGAAAGGAACTTGAAGGACTTGGTTGAAGTACCGTCATCAGTGCTGGCCAATTTGGAGATACTGCATGCAAAGCGAATGGAAGATGTGTTGGAGCATGCTTTTGAAGGAGGGTGCCCTTGGAGACAACACTCAAAATTATAG 2685 0.4581 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVRDAAEIKPVGPTVSQGAGTDSLDQSAKVQGGSSDSNKLDTKRQNDVVHWHTRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMSKTEMEQVEQDPDFIMLSRQFKATAMELISALELVNILLQKQKTGGRTKVLLDTVPIHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRHLQSIRVAEKISQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLAALERKMQSAGMPQNIWKHAHRELRRLKKMQPQQPGYSSSRVYLELLADLPWQKASEELELDLKAAQKRLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRIQPIPPPLRDRMEVIELPGYTPEEKLQIAMHHLIPRVLDQHGLSSEFLQIPEGMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQVVPLNKGMQGLAAPLMENRLADGTEVEMEVIPMGVNSRDISNTFRIASPLVVDEAMLEQVLGPPRFDDGEAAERVAAPGVSVGLVWTAFGGEVQFVEATAMVGNGELHLTGQLGDVIKESAQIALTWVRARATDFRLAVADGVNLLEGRDVHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRSDTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLVEVPSSVLANLEILHAKRMEDVLEHAFEGGCPWRQHSKL* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1286 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 625 IPR027417 -
Dod05g1286 894 SUPERFAMILY PUA domain-like 10 259 IPR015947 -
Dod05g1286 894 Coils Coil 295 315 - -
Dod05g1286 894 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 260 IPR003111 -
Dod05g1286 894 PIRSF Lon_proteas 661 885 IPR004815 GO:0004176|GO:0005524|GO:0006508
Dod05g1286 894 PIRSF Lon_proteas 1 633 IPR004815 GO:0004176|GO:0005524|GO:0006508
Dod05g1286 894 Coils Coil 601 621 - -
Dod05g1286 894 MobiDBLite consensus disorder prediction 67 100 - -
Dod05g1286 894 Pfam Lon protease (S16) C-terminal proteolytic domain 676 883 IPR008269 GO:0004176|GO:0004252|GO:0006508
Dod05g1286 894 Pfam ATPase family associated with various cellular activities (AAA) 411 548 IPR003959 GO:0005524|GO:0016887
Dod05g1286 894 Gene3D - 372 550 IPR027417 -
Dod05g1286 894 SUPERFAMILY Ribosomal protein S5 domain 2-like 702 882 IPR020568 -
Dod05g1286 894 Gene3D - 311 359 - -
Dod05g1286 894 TIGRFAM lon: endopeptidase La 13 882 IPR004815 GO:0004176|GO:0005524|GO:0006508
Dod05g1286 894 MobiDBLite consensus disorder prediction 72 95 - -
Dod05g1286 894 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 894 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Dod05g1286 894 Gene3D - 1 162 IPR046336 -
Dod05g1286 894 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 702 718 - -
Dod05g1286 894 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 814 833 - -
Dod05g1286 894 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 784 803 - -
Dod05g1286 894 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 837 855 - -
Dod05g1286 894 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 415 434 - -
Dod05g1286 894 SMART AAA_5 407 552 IPR003593 -
Dod05g1286 894 ProSiteProfiles Lon proteolytic domain profile. 699 884 IPR008269 GO:0004176|GO:0004252|GO:0006508
Dod05g1286 894 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 787 795 IPR008268 GO:0004176|GO:0004252|GO:0006508
Dod05g1286 894 Gene3D - 701 887 IPR014721 -
Dod05g1286 894 CDD AAA 392 553 - -
Dod05g1286 894 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 894 IPR027501 GO:0004252|GO:0006515
Dod05g1286 894 Gene3D - 551 690 - -
Dod05g1286 894 Gene3D - 179 303 - -
Dod05g1286 894 ProSiteProfiles Lon N-terminal domain profile. 11 260 IPR003111 -
Dod05g1286 894 SMART lon_5 10 260 IPR003111 -
Dod05g1286 894 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1286 Dod-Chr5 36292457 36302802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1286 K01338 - gmx:100789982 1578.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1286 05 36292457 36302802 Dod05g1286 05 36292457 36302802 ECH