Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1278 ATGGCCACCATGGAATCGTTGATCGGACTCGTCAACCGGATTCAGCGCGCATGCACCGTCCTTGGCGACCACGGAGGCGACGCCGCTCTCCCTACGCTCTGGGAGGCTCTTCCTTCCGTCGCCGTCGTCGGCGGCCAGAGTTCTGGAAAGTCGTCGGTCTTGGAAAGCATCGTTGGCCGTGATTTTCTGCCCCGGGGATCAGGAATTGTGACGCGGAGGCCTTTGGTGCTGCAGCTGCACAAAACAGAAGAGGGAACACAAGATTATGCAGAGTTTCTGCACTTGCCAAAGAAACGGTTTACAGACTTCTCTAAGGTTCGAAGGGAAATTGAAGAGGAAACTGATAGAATGACTGGGAAATCAAAACAGATATCTCCTGTTCCAATTCATCTCAGCATTCACTCTCCAAATGTTGTCAATCTAACGCTGATAGATCTGCCTGGTTTGACAAAGGTTGCGATAGAGGGACAGCCAGAAAGTGTTGTTCAAGAGATCGAAAGCATGATTCATTCATATGTTGAGAAGCCTAATTGCTTAATTCTGGCCATTACTCCGGCAAATCAAGATATAGCAACATCGGATGCTATCCAGGTTGCCAGACAAGTTGACCCAACAGGTGAAAGAACATTTGGTGTGTTGACAAAGCTTGATTTGATGGACAAGGGAACAAATGCTTTGGATGTCCTTGAGGGAAGATCATATCGTCTTCAAAACCCTTGGGTGGGAATTGTAAATCGTTCTCAGGCAGATATTAATAGGAATGTGGATATGATTGCTGCTAGACAACGGGAGCATGAATTTTTTGCCACCAGTCCTGATTATGCGCACTTGGCCAGCAAAATGGGCTCGGAATATCTAGCAAGGCTTCTCTCAAAGCACTTAGAGTCAGTGATAAGAGCTCGGATTCCAGGGATTGCCTCTTTAATTAATAGAAGCATTGATGAGCTTGAAGCAGAGTTGGCGCACCTTGGTAGGCCAGTTGCTATTGATGCTGGGGCCCAGCTGTACACCATTCTGGAATTATGCCGTGACTTTGACCGGGTATTTAAGGAGCATTTAGATGGAGGGCGACCAGGTGGTGACCGAATTTATGCAGTTTTTGATTTCCAACTTCCTGCTGCAATGAGAAAGCTTCCATTCGACCGTCACTTGTCATTGCAAAATGTGAGAAAAGTTATTTCAGAGGCAGATGGGTACCAGCCTCATCTAATTGCTCCAGAGCAAGGATACCGGCGTCTCTTAGAGGGTTCACTTAACTATTTTAAAGGTCCAGCCCAAGCTTCTGTGGATGCTGTTCACTTTGTTCTGAAGGAAATTGTGAGAAAGTCAATTTCAGAAACACAGGAACTGAAACGCTTTCCAACTCTTCAAGCTGAGATAGCAGCAGCTGCCAATGAGGCATTAGAGAGATTTCGTGAAGATAGTAAGAAGACAACGCTACGACTAGTGGAAATGGAATCATCCTATCTCACTGTTGATTTCTTCCGGAAACTCCCACAGGAAGCCGAAAAGGGAGGAAATCCAGCTCCCTTATCCGCAGACCGATACTCTGAAGGGCACTTCCAGAGGATCGGTTCAAATGTTTTATCTTATATTGGGATGGTGTCAGACACGCTGAGGAATACCATCCCAAAGGCTGTTGTTCATTGTCAAGTGCGGGAAGCTAAGCGATCTTTACTGGACCAATTTTACATTCAACTGGGCAGAAAGGAGGGAAGGCAACTGGCACAGTTGCTTGATGAAGATTATGCGTTGTCGGAGCGGAGGCTGCAATGTGCCAGGAGGCTGGAGTTATATAGGTCTGCAAGGGATGAGATTGATGCAGTTTGTTGGTCGGGATGA 1842 0.4685 MATMESLIGLVNRIQRACTVLGDHGGDAALPTLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEEGTQDYAEFLHLPKKRFTDFSKVRREIEEETDRMTGKSKQISPVPIHLSIHSPNVVNLTLIDLPGLTKVAIEGQPESVVQEIESMIHSYVEKPNCLILAITPANQDIATSDAIQVARQVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQNPWVGIVNRSQADINRNVDMIAARQREHEFFATSPDYAHLASKMGSEYLARLLSKHLESVIRARIPGIASLINRSIDELEAELAHLGRPVAIDAGAQLYTILELCRDFDRVFKEHLDGGRPGGDRIYAVFDFQLPAAMRKLPFDRHLSLQNVRKVISEADGYQPHLIAPEQGYRRLLEGSLNYFKGPAQASVDAVHFVLKEIVRKSISETQELKRFPTLQAEIAAAANEALERFREDSKKTTLRLVEMESSYLTVDFFRKLPQEAEKGGNPAPLSADRYSEGHFQRIGSNVLSYIGMVSDTLRNTIPKAVVHCQVREAKRSLLDQFYIQLGRKEGRQLAQLLDEDYALSERRLQCARRLELYRSARDEIDAVCWSG* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1278 613 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 63 72 IPR019762 -
Dod05g1278 613 PRINTS Dynamin signature 185 203 IPR022812 -
Dod05g1278 613 PRINTS Dynamin signature 204 220 IPR022812 -
Dod05g1278 613 PRINTS Dynamin signature 135 152 IPR022812 -
Dod05g1278 613 PRINTS Dynamin signature 227 246 IPR022812 -
Dod05g1278 613 PRINTS Dynamin signature 37 55 IPR022812 -
Dod05g1278 613 PRINTS Dynamin signature 62 79 IPR022812 -
Dod05g1278 613 Gene3D Dynamin, middle domain 330 579 - -
Dod05g1278 613 Gene3D - 4 312 IPR027417 -
Dod05g1278 613 SMART GED_2 516 609 IPR003130 GO:0003924|GO:0005525
Dod05g1278 613 CDD DLP_1 37 303 IPR001401 GO:0003924|GO:0005525
Dod05g1278 613 Pfam Dynamin GTPase effector domain 517 609 IPR003130 GO:0003924|GO:0005525
Dod05g1278 613 SMART dynamin_3 4 254 IPR001401 GO:0003924|GO:0005525
Dod05g1278 613 ProSiteProfiles GED domain profile. 521 613 IPR020850 -
Dod05g1278 613 PANTHER - 3 612 - -
Dod05g1278 613 Pfam Dynamin family 40 215 IPR045063 -
Dod05g1278 613 Pfam Dynamin central region 224 491 IPR000375 -
Dod05g1278 613 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 34 303 IPR030381 GO:0005525
Dod05g1278 613 PANTHER DYNAMIN 3 612 IPR022812 -
Dod05g1278 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1278 Dod-Chr5 36165486 36172309 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1278 - - tcc:18606108 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1278 05 36165486 36172309 Dod05g1278 05 36165486 36172309 ECH