Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1258 ATGAAATCAAGGAGAGGAAAACGCTCAGAGGCCTTTTGGCCCTCCATTGTGATGAAGAAATGGTTAAATATAAAGCCAAAACTGTATGACTTTAGCGAAGATGAAGTAGACACTGAAACCGAGAGTGAAGATGATGCTTGCTCTCTTAAAGATTCGAGACTTGGCGTGCATGAAGATAATCCACGTAGAACACAATCCAGATTCCCTAATCAAACATCAGAAGCATCTTGTAAGGGCTACAAGGCTAGACACAGAAGAGGAAAATCAGAAACTCTGCGTGTTCAGTACATAAATACAAAGGAAGTGAGGATAACAATCGGCACTTGGAATGTTGCTGGAAGAATTCCATGTAAGGATCTTGAGATTGAGGACTGGCTTTGTACTGAAGAGCCAGCAGATGTTTACATTATTGGTTTCCAAGAGGTAGTCCCATTAAATGCTGGAAATGTACTGGGAGCAGAGGACAATACACCAATCCCAAAATGGGAGGCGATTATTCGAAGAACTCTGAACAAATCTTCTGAATCTGAAAGCAAACACAAAAGCTTCAGTGGCCCTCCTTCTCCTGTATTAAGAACTTCTTCTGCTCCAGATGTTCTAGTAGACAGTATAGATGCCAATCCATTAGATATGATGGATGAGGAGTATCTAGGAGCTTTTGACAATGATGATCTGGAAGAGGAGGAAGTGAAAAACAACATAATTGGTATAGGAAAGAATTTACAGCTGAGGAGAATATATGGTATTGATCTTCAGACTACACTAGACTGGCCGGAACGTCCATTAGATGCAGTTCCCCTTGATGATTCCCCCCCGAAATTGCGGAGAGTACTAAGCAGCACAGCGAGAATTGGCTTTGATCGGACGGATAATGCTTTAGCGAATGGTGGTGGAATGACACGTTCGCACCATAGTTCTGGAAATCTGAATTTGTTCTGGAAAGAGCAGAAAGCGGTGCCTGAAGTGATTGATCCCATTGATGACGTGTCTGACATGTTATCTGATGAGGAAGATGATGATTTTTTCGAATTACCAAATAACAAAGATGATAATGGAACAGGCGCCATGAAATCGCGTCCTAAGTATGTCCGGATTGTCAGCAAGCAGATGGTAGGGATATATGTATCTGTGTGGGTGCAAAGGAAGTTGAGGAGGCACATTAATAACTTGAAAGTTTCACCTGTTGGAATTGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCGGTCAGTATGTCTCTCTTTCAGTCTCGTCTGTGCTTTGTTTGTTCCCATCTGACGTCTGGCCAGAAGGATGGAGCAGAACAAAGACGAAACTCGGATGTTCATGAAATTATACGGCGCACTTGCTTCTCATCTGTCCTTGACTCAGATCAACCACAAACTATCCCATCTCACGATCAGATCTTCTGGTTTGGGGATTTGAACTATCGTATAAACATGTTGGATGTGGAGGTTCGAAAGTTGGTGGCTCTAAAGAAGTGGGATGAACTGATGAATTATGATCAGCTAAACAATGAACTAAGTAGTGGGCATGTGTTTGATGGATGGAAAGAGGGGGTGATAAACTTCCCACCTACTTACAAGTACGAGTTCAATTCTGATAAATATGTTGGTGAGAACCCAAAAGAAGGGCAAAAACAGAGATCTCCAGCTTGGTGCGATCGTATACTGTGGCTTGGAAAAGGAATAAGGCAACTTCAGTATACACGTGCAGAAAATAAGCTCTCAGATCATCGACCAGTTAGTTCGATCTTCTCTGTTGATGTTGAGGTATTTGACCAACGTAAGCTACAACGAGCTCTCAATTTCGCTAGTGCAGCAGTGCACCCAGAGGTTTTCCTTCAAGACGATGAGGACTTGTAG 1869 0.4264 MKSRRGKRSEAFWPSIVMKKWLNIKPKLYDFSEDEVDTETESEDDACSLKDSRLGVHEDNPRRTQSRFPNQTSEASCKGYKARHRRGKSETLRVQYINTKEVRITIGTWNVAGRIPCKDLEIEDWLCTEEPADVYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRTLNKSSESESKHKSFSGPPSPVLRTSSAPDVLVDSIDANPLDMMDEEYLGAFDNDDLEEEEVKNNIIGIGKNLQLRRIYGIDLQTTLDWPERPLDAVPLDDSPPKLRRVLSSTARIGFDRTDNALANGGGMTRSHHSSGNLNLFWKEQKAVPEVIDPIDDVSDMLSDEEDDDFFELPNNKDDNGTGAMKSRPKYVRIVSKQMVGIYVSVWVQRKLRRHINNLKVSPVGIGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEQRRNSDVHEIIRRTCFSSVLDSDQPQTIPSHDQIFWFGDLNYRINMLDVEVRKLVALKKWDELMNYDQLNNELSSGHVFDGWKEGVINFPPTYKYEFNSDKYVGENPKEGQKQRSPAWCDRILWLGKGIRQLQYTRAENKLSDHRPVSSIFSVDVEVFDQRKLQRALNFASAAVHPEVFLQDDEDL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1258 622 Gene3D Endonuclease/exonuclease/phosphatase 83 185 IPR036691 -
Dod05g1258 622 SMART i5p_5 298 595 IPR000300 GO:0016791|GO:0046856
Dod05g1258 622 MobiDBLite consensus disorder prediction 173 197 - -
Dod05g1258 622 MobiDBLite consensus disorder prediction 39 74 - -
Dod05g1258 622 SUPERFAMILY DNase I-like 94 606 IPR036691 -
Dod05g1258 622 MobiDBLite consensus disorder prediction 43 64 - -
Dod05g1258 622 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 618 IPR045849 GO:0004445|GO:0046855
Dod05g1258 622 Gene3D Endonuclease/exonuclease/phosphatase 330 614 IPR036691 -
Dod05g1258 622 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1258 Dod-Chr5 35640956 35650305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1258 362 596 Acyl Lipid Metabolism Gene Families AT1G65580 31.295 2.45e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1258 K24221 - gmx:100807214 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0883 02 11313053 11317997 Dod05g1258 05 35640956 35650305 PCT