Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1101 ATGGACGCGGGAGCATCTGCCTCCTCCGCCGCGGCGGAGGATCAGTCACCGGCGGCCGCCATATCGAGGTGGAAGTTCGAGGTATCCCGCAAGTACCAGCACCTCCTGGACAAAACGACGCCGCACAGGCTGCACCGGTGGCTGGGGACACTTGCCGTGGGCTTCATTTACGTGTTGCGCGTGTACCTCGTGCAAGGCTTCTACATCGTGTCGTACGGCCTTGGAATCTACATCCTTAACCTGCTGATCGGGTTCCTGTCCCCTCAGGTGGATCCCGAGATTCAGGAACTCTCCGATGGCCCCAGACTTCCCACCAGGGGTTCCGATGAGTTCCGCCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGGTACTCAATCACGAAGGCATTCTGCATTTCATTTGTGATGACTTTCTTTAGTGCATTTGATGTTCCAGTATTCTGGCCAATACTCCTCTTCTATTGGGTGGTCCTATTCACGCTTACCATGAGGAGACAGATATCACACATGATCAAATACAGATATGTACCTTTCACATTTGGGAAACAGGTAAATTTTAATTCCCGTACCTTTGAAATTGTCATTAAGATGTTGGAAATGGATTGTCTAAAATGA 618 0.5146 MDAGASASSAAAEDQSPAAAISRWKFEVSRKYQHLLDKTTPHRLHRWLGTLAVGFIYVLRVYLVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELSDGPRLPTRGSDEFRPFVRRLPEFKFWYSITKAFCISFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYRYVPFTFGKQVNFNSRTFEIVIKMLEMDCLK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1101 205 PANTHER PROTEIN RER1C 1 185 - -
Dod05g1101 205 PANTHER PROTEIN RER1 1 185 IPR004932 GO:0016021
Dod05g1101 205 Pfam Rer1 family 25 184 IPR004932 GO:0016021
Dod05g1101 205 PIRSF AtER_Rer1p 7 193 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1101 Dod-Chr5 30643051 30646350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1101 8 184 Miscellaneous Gene Families AT4G39220 70.056 7.36e-94 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1101 - - ahf:112799570 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1101 05 30643051 30646350 Dod05g1101 05 30643051 30646350 ECH
Dod02g0742 02 9610095 9612536 Dod05g1101 05 30643051 30646350 PCT