Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1076 ATGGATCACAAAACGTGGCTTTGGAGGAAAAAATCCTCAGAAAAGATAACAGTAACAACTGACAATGGCGATGTTACTTCAAAAGAAAACCAAGAGGTACAGGCGCTAATAGCTGATAAAGAAGAATTGGAGAAGGACTTGAAAAGATTAAATGATAAGCTTGCTGTGGCACTTTCTGACTGTAATGCCAAAGATGATCTGGTGAAGAAACAAATAAAAATTGCGCAAGATGCAGTGGAAGGTTGTGAGAAGGCAAAAGCTGAAGTGTTGTCTATGAAGCAAGATTTTGATGAAGCTTTGCAGCAGCGATTAGTTTATGACGAACGAGTAGCCCATTTGAACGGAGCTCTAAAGGAATGTATGCAGCAGTTACGCTTTGTTCGAGAAGAACAAGGGCAAAGGATTCATGATGCTGTGATGAAGGCTTCGAAAGAATTTGAAAAAGAGCGCAAGGTTTTGAGGGAGCAGTTATCTGAGACCAGTAAAAGGCTAGCAAAAGCTGAGATCGAAAACTCTCATCTTAATAAGTCCATTCTTGCAAAAGAAAATTTGGTTGAAGATCTGAAAAGACAGTTGAATCAAGCTGAAGCAGATCATAGTGCACTGATGATTAGATTAGAGTCCTCTGAAAATGATAATGCCTCTTTCAAGTATGAGGTTCGAGTCCTTGAAAAGGAACTTGAGATCAGAAATGAGGAGAGAGAGTTTAATCGTCGGACAGCTGATGCTTCTCACAGGCAGCACTTAGAGAGTGTTAAAAAAATTGCCAAGTTAGAATCAGAATGTCAGAGGCTGCGCCTTCTGGTTCGGAAACGGTTACCGGGTCCTGCTGCCCTGGCAAAAATGAAAAATGAAGTTGAAGTTCTGGGACGGGATTCGGTTGAAATGAGGAGGAAGAAGTTGAACTCAACCAGTTTAATGGTTGAATCTTCTTTCGACAGTTCTCCTGAGACTCCTGTTAGAAGAATCAATACTTTGACTGAGCAGCTATTTGCCATTGAAGAAGAAAACAAGACTTTAAAAGAATCCCTAAACAGGAAAATGAACGAGCTACAATTCTCAAGAGTAATGCTTTCTCGTACAGCTTCCAAACTTTTGCAACTTGAGTCCCAGATTGAAGAATCATCCAAAGGTCAATTAACCCTGGAGGAACCTCGAAGTAACCTTGCATCACATGAGATCTCTTTGGCATCAATGTCTGACATTGGCAGTGATGACAAGGTTAGCTGTGGTGAGTCCTGGGCTTCTGCATTGATTTCAGAATTAGAACACTTCAGAAGTGAAAAGCAGAAAGAGTCACTGTCATGCAAAAGTGCTGGAGCTTCAGACATAAAACTTATGGATGACTTCCTTGAAATGGAAAAATTAGCAGTAGTCTCTGTTGAAAAAGCCCGTGAAATCTCTCATTCTTTAAAAGGAGTCAATGAAATTAATGGTTTCTCAGAGACCATGAAAAATGAGGCTACCTCTGAAGTATTAGGTAAGGAGATTGTTCCAGTGTCCTGA 1506 0.4044 MDHKTWLWRKKSSEKITVTTDNGDVTSKENQEVQALIADKEELEKDLKRLNDKLAVALSDCNAKDDLVKKQIKIAQDAVEGCEKAKAEVLSMKQDFDEALQQRLVYDERVAHLNGALKECMQQLRFVREEQGQRIHDAVMKASKEFEKERKVLREQLSETSKRLAKAEIENSHLNKSILAKENLVEDLKRQLNQAEADHSALMIRLESSENDNASFKYEVRVLEKELEIRNEEREFNRRTADASHRQHLESVKKIAKLESECQRLRLLVRKRLPGPAALAKMKNEVEVLGRDSVEMRRKKLNSTSLMVESSFDSSPETPVRRINTLTEQLFAIEEENKTLKESLNRKMNELQFSRVMLSRTASKLLQLESQIEESSKGQLTLEEPRSNLASHEISLASMSDIGSDDKVSCGESWASALISELEHFRSEKQKESLSCKSAGASDIKLMDDFLEMEKLAVVSVEKAREISHSLKGVNEINGFSETMKNEATSEVLGKEIVPVS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1076 501 Pfam Filament-like plant protein, long coiled-coil 64 501 IPR008587 -
Dod05g1076 501 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 486 - -
Dod05g1076 501 PANTHER FILAMENT-LIKE PLANT PROTEIN 7 1 486 - -
Dod05g1076 501 Coils Coil 82 102 - -
Dod05g1076 501 Coils Coil 143 226 - -
Dod05g1076 501 Coils Coil 279 299 - -
Dod05g1076 501 Coils Coil 323 350 - -
Dod05g1076 501 Coils Coil 26 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1076 Dod-Chr5 29431348 29433305 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1076 - - aprc:113858788 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0727 02 9424095 9429692 Dod05g1076 05 29431348 29433305 ECH
Dod05g1076 05 29431348 29433305 Dod05g1076 05 29431348 29433305 ECH
Dod02g0727 02 9424095 9429692 Dod05g1076 05 29431348 29433305 PCT