Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0883 ATGGGTGGCAGAAAAGACAGGGTGGACTCGTTAGCAGAGGATCACCACACCACGTGTTCATCTGCTGCATCACCATCGTGGTCGTCGTCGTCAGTGAGCGAGGCCTTGCTGTTCACCACCTTGTGCATCATTGGCCTCCCCGTTGATGTTCACGTCAAAGATGGCTCCGTCTATTCTGGAATCTTCCACACTGCTTCAGTCGATGGGGATTACGGTATTGTTTTGAAGAAGGCAAGGATGACCAAGAAGGGAAAGGGAAAAACCAACGTGGAAAAGGATTGTTTGGTAGATACATTGGTGATTCTGTCGGGTGATCTTGTACAAGTTGTTGCCAAGGAAGTAATGCCTCCTGCTGATAGTGTTGGTGGAAATATAACTGGTGATGATGAGGAAGCAGTTGTGAACAGTATTTCTTGTTCCAAGAGTCCAACATGTGAGGTAGAGAATCATAAAGGGTCTTTGATGGATGCAAAGCTGGTTAATCAATCAAGACAGGCTGGAGGTGACAAGTCAAAAGGGAATGCTGATGACTGCAGACAGACATCTGAGTTTGTTAGAGGCAAAACTGATGAAAATATTCAAAGCTGTCATTCAACCCATGAAACTGATACATTTCTTGTCCAAGTGGAAGCTGTTGAGCATAGAAGCTCATGTACGACATCAAATCCATCTGATGATGGGTTACAATGCAATAATGCTCCTGCCTCTGTTAAGGCCGATGATCGGTGTAGTGACAAGTTTTCTTCAGTGGACAATGCTTCTCTGAGTTCCACCCAAGGTGTAGATCTCAACTCTGAGTCGCACAATTTGCCGGCAAAATCTGTTGAAACATCTGCTACTAGGGGTACTGATTCCACCAGAAATGCTAAGGAGTTTAAGCTCAACCCTGCTGCCAAAGTTTTCTCTCCATCTTCCATAAATCCTCTTTCTGGAACTGCTGCTGTGCCAACTGCTGCAAACATGGTTTATGTACCAAATAGTTCTCCTGCGGCACCTGTCGCTACTGTTCAACCTGAAACTGGGTTCAGTACTTTTGCTTCTCAGCCTTCTGTGCCTGTTAAGGTTGCACAGTATAGTAATTTGACAGTAGGAAATGGTGGCACTGGTTCCCAATTTTTGCAGCCTCAGATTGTTGGACAACTGGCACATAGGGCACAGCCTGTACGATACGGTGCACATTATGCTCCTGTTTTGTCTGAACCTGCATATTTGCAACCAATCTCTCCTGCTGTTATGGTTGGACGTTCGGGGCAGTTAGTCTATGTTCATCCAGTTTCCCATGATTCGGTTCATGGTGCAACAGCTATGTCCCCAGTATCAGCTCGGCCTCTGTTGAATCATGTACAATTTCCAAAGCAGCAAGGGGGCACAGCAGGTCAAGCAATGGCAATTTGTGTGCCGCCACCTGTCATAACAGGCGCACAGCAACCCTTTGCACTTCAAAGCCACATTCCACTATTGCAACCTGGCTTTCCGGTAACCAGCCCTGTTTCAGTGCCAGGAGCAAATGGTTTCTATGGCACTAAGTTTTCATGA 1536 0.4629 MGGRKDRVDSLAEDHHTTCSSAASPSWSSSSVSEALLFTTLCIIGLPVDVHVKDGSVYSGIFHTASVDGDYGIVLKKARMTKKGKGKTNVEKDCLVDTLVILSGDLVQVVAKEVMPPADSVGGNITGDDEEAVVNSISCSKSPTCEVENHKGSLMDAKLVNQSRQAGGDKSKGNADDCRQTSEFVRGKTDENIQSCHSTHETDTFLVQVEAVEHRSSCTTSNPSDDGLQCNNAPASVKADDRCSDKFSSVDNASLSSTQGVDLNSESHNLPAKSVETSATRGTDSTRNAKEFKLNPAAKVFSPSSINPLSGTAAVPTAANMVYVPNSSPAAPVATVQPETGFSTFASQPSVPVKVAQYSNLTVGNGGTGSQFLQPQIVGQLAHRAQPVRYGAHYAPVLSEPAYLQPISPAVMVGRSGQLVYVHPVSHDSVHGATAMSPVSARPLLNHVQFPKQQGGTAGQAMAICVPPPVITGAQQPFALQSHIPLLQPGFPVTSPVSVPGANGFYGTKFS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0883 511 MobiDBLite consensus disorder prediction 1 27 - -
Dod05g0883 511 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 18 508 - -
Dod05g0883 511 Pfam Ataxin 2 SM domain 34 112 IPR025852 -
Dod05g0883 511 PANTHER ATAXIN 2-RELATED 18 508 IPR045117 GO:0003723
Dod05g0883 511 MobiDBLite consensus disorder prediction 255 288 - -
Dod05g0883 511 MobiDBLite consensus disorder prediction 255 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0883 Dod-Chr5 15768893 15777691 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0883 - - gmx:100809285 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0883 05 15768893 15777691 Dod05g0883 05 15768893 15777691 ECH