Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0874 ATGAGGAGGAGGCCTGGAATCGGAGGGTTGCAGACAGCTGCTGCTGCAAGGGATCAGTATCGTTTGCTTGGTGAGAATGTAGCCAAGATCAGAACCGATTTGATGAAGGAACAGCTTGCCACGTTTCGATCTCAGCTTGAAGATTTCGCCCGCAAGCACAAGAATGACATCCGCAAGAACCCCGCATTCAGATCACAGTTTCACGAGATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCGTCAAATAAGGGTTTCTGGGCTGAGTTGTTAGGAATTGGTGACTTCTATTATGAACTTGGAGTTCAAATAGTGGATATTTGCTTGGCCACTAGACCCCTAAATGGAGGACTGATCAACCTGCAGGAACTCTGTCATCTCCTTCGTCAGAGACGAAAAAGTGATCGCGGAGTTGTTTCTGAGGATGATTGCCTGCGAGCTATCAGTAAGCTGAAGGTGCTGGGCAGTGGTTTTGAAGTTATTTCTGTTGGAAAGAGAAAACTTGTCCGTTCGGTTCCAACTGAGTTGAACAAAGACCACAATGAAATCCTAGAACTTGCCCAGGCTCAAGGATTTGTTACTGTTGATGAAGTAGAGAGGCGGCTATCTTGGACTTCAGGTCGTGCCATTGATGCCCTTGATACATTACTCGACGAAGGACTTGCAATGATAGATGATGGCCATAGAGATGGTAAACGGCGGTATTGGTTTCCCTGTGTATCTCCCATCTCATCTTCAATAGGAGCTGATTCCTAA 753 0.4648 MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINLQELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHNEILELAQAQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVSPISSSIGADS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0874 250 Gene3D - 91 171 IPR036388 -
Dod05g0874 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 241 IPR016689 GO:0000814|GO:0071985
Dod05g0874 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Dod05g0874 250 Gene3D - 24 85 - -
Dod05g0874 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
Dod05g0874 250 Gene3D - 172 249 IPR036388 -
Dod05g0874 250 PIRSF ESCRT2_Vps22 1 245 IPR016689 GO:0000814|GO:0071985
Dod05g0874 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0874 K12188 - rcu:8282922 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0874 05 15634518 15641673 Dod05g0874 05 15634518 15641673 ECH