Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0873 ATGATCAAATGGACGAAGCAGTTGAACGCTGCGTTTGGGGCTTCGTTTCTTTGGCTGATTTGCTTGATTTACTTCACCCAGGGTTTTAGGACTTTTGTCTGGACTGCAATTTCCTACCAGCTTAAAGATAATCTTAAGTTGTCACCCTCAGCTTCCCAATTTGTGTTTTCAATAGCATTTTTCCCATGGAGCATTAAACCATTATACGGAATACTATCTGATTGTATCCCAATTAAAGGAAGAAAACGGATTCCCTACTTAGTGCTTGCAACTGTGCTCTCCCTTGTGCCATGGCTTATTCTAGGCCTAATTTCAACCTTGAGGGATTCAAGATGGCACCTGATGATATCCTTGACTGTGCAAAACTTGGGCTCAGCTATGGCAGATGTCGTTGTCGATGCAATGATAGCTGAGGCAGTACGATATGAACGGGCTTCATTTGCTGGAGACCTCCAGTCAATATCATGGTCGGCAATGGCTTTGGGAGGAATATGTGGGAGTTTGTTAGGAGGATATGCATTATCCAATTTACAGATAGATACTATTTTTCTTCTTTTTTCTGTTCTACCGTGCATACAGTTATTTTCATGCTGTTTTGTGGGGGAGAACTCTGTAGATAGAAAAGTTTTATTAGAGGATTCTATTCGAGATTCTGATACAAATGGTAGCACCATAGATGAAGATATTATTTTAACCAAAAAGTCACACAGCACTACAACAAGAAGAAAAAGGGGGAAAAAGAAGGGGAAAACTAGACCAGTAAATACAAGCAAATCAAAGATCCTTGAAAAAAGAGACTCCTTGGGGTTCAAGTGGTTCCATTCTTTGAAGAAAGCAATTTATGATTTGTGTCATGCATTTAGACAGCCAATGATTTGGAGACCAATGTCTTGGTTTTTCCTTGCCCACGTCACTGTTCCCAATCTTTCAACAGTCATCTTCTACTACCAAACAGAGATTTTGAAGCTTGAAGCATCTTTCCTGGGGACCGTACGGGTTGTTGGATGGTTAGGACTTATGCTGGGCACCTTCATTTATAATCGCCACCTAAAGTATATGACTCTACGAAGAATTCTCATGTGTGCCCATATGGGTTTGGCATTTTTGAATCTTGTGGAGATTGTTTTAGTGTCTAGGACAAATATAGCCTTTGGAGTTTCAGATAGGATTATGGTGCTCTTTGGCTCAGCTCTTGCTGACGGAATCAATCAATTCAAGTTCATGCCTTTCCTGATTTTATCTGGGCAACTATGTCCTCCAGGAATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAATTTGGGAACAACAATTGGTTCTTTTGTGGGTGCTGGGTTGGCTTCTATGTTGAACATTGATTCAGGATCATTTGACAATCTTCTATTGGGCATCATGATTCATGCTGTGTGTAATTTCATTCCAGTTGCTTTTCTATTTCTGATACCAAAAGAAGCTACAGGTTTATCAGTGTAG 1479 0.4003 MIKWTKQLNAAFGASFLWLICLIYFTQGFRTFVWTAISYQLKDNLKLSPSASQFVFSIAFFPWSIKPLYGILSDCIPIKGRKRIPYLVLATVLSLVPWLILGLISTLRDSRWHLMISLTVQNLGSAMADVVVDAMIAEAVRYERASFAGDLQSISWSAMALGGICGSLLGGYALSNLQIDTIFLLFSVLPCIQLFSCCFVGENSVDRKVLLEDSIRDSDTNGSTIDEDIILTKKSHSTTTRRKRGKKKGKTRPVNTSKSKILEKRDSLGFKWFHSLKKAIYDLCHAFRQPMIWRPMSWFFLAHVTVPNLSTVIFYYQTEILKLEASFLGTVRVVGWLGLMLGTFIYNRHLKYMTLRRILMCAHMGLAFLNLVEIVLVSRTNIAFGVSDRIMVLFGSALADGINQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGTTIGSFVGAGLASMLNIDSGSFDNLLLGIMIHAVCNFIPVAFLFLIPKEATGLSV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0873 492 MobiDBLite consensus disorder prediction 235 256 - -
Dod05g0873 492 MobiDBLite consensus disorder prediction 236 254 - -
Dod05g0873 492 SUPERFAMILY MFS general substrate transporter 15 489 IPR036259 -
Dod05g0873 492 Pfam BT1 family 27 486 IPR039309 -
Dod05g0873 492 TIGRFAM fbt: folate/biopterin transporter 19 485 IPR004324 GO:0016021
Dod05g0873 492 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 1 491 IPR039309 -
Dod05g0873 492 CDD MFS_FBT 18 481 - -
Dod05g0873 492 Gene3D MFS general substrate transporter like domains 14 480 IPR036259 -
Dod05g0873 492 Coils Coil 492 492 - -
Dod05g0873 492 PANTHER FOLATE-BIOPTERIN TRANSPORTER 4-RELATED 1 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0873 Dod-Chr5 15628017 15632918 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0873 - - gmx:100781251 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0873 05 15628017 15632918 Dod05g0873 05 15628017 15632918 ECH