Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0797 ATGGCTGTTCCGGTGGTGGCAGAGGGCCCCGCCGTCGCGGCGTTCCGGTCGGTGATGCTTCGGGTCCGGCAGGCGGCGGAGAGATCGAGAACCCGACCCGAATCGATCCGGGTCGTGGCCGTCTCGAAGACGAAGCCGGTTTCCATGATTCGGCAACTCTACGACGCAGGGCACCGTTGCTTCGGCGAGAACTACGTTCAGGAAATCGTGGATAAGGCTCCTCAGCTTCCACAAGACATCGAGTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGCCAAGACGCTGTTGGGTGGAGTTCCAAATCTTGCCATGGTTGAGGGCGTGGACAATCAGAAGGTGGCAAATTATCTTGATCGTACAGTATCTATGCTTGGAAGAAATCCACTGAAGGTTTTGGTGCAAGTAAATACCAGTGGAGAAGCATCTAAATCTGGTATTGATCCTTCCAATTGTGTTGAGCTTGCAAAACATGTAAAATTGTGCTGCCCAAACCTCATGTTCTCTGGCTTAATGACAATAGGGAGGCCTGACTACACCTCAACTCCAGAGAACTTCGAGAGCCTGTCAAATTGCAGAACTGAATTATGCAAGGCACTTGAAATGCCCGAGAGCCAATGTGAACTGTCAATGGGCATGTCTAGCGACTTTGATTTAGCGATTGAAATGGGAAGTACTAATGTGAGAATTGGGTCGACAATATTTGGACCAAGGGAGTATGCAAAGAAACAAGAATAA 738 0.4946 MAVPVVAEGPAVAAFRSVMLRVRQAAERSRTRPESIRVVAVSKTKPVSMIRQLYDAGHRCFGENYVQEIVDKAPQLPQDIEWHFIGHLQSNKAKTLLGGVPNLAMVEGVDNQKVANYLDRTVSMLGRNPLKVLVQVNTSGEASKSGIDPSNCVELAKHVKLCCPNLMFSGLMTIGRPDYTSTPENFESLSNCRTELCKALEMPESQCELSMGMSSDFDLAIEMGSTNVRIGSTIFGPREYAKKQE* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0797 245 CDD PLPDE_III_YBL036c_euk 16 236 - -
Dod05g0797 245 Gene3D Alanine racemase 9 245 IPR029066 -
Dod05g0797 245 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 7 243 IPR011078 GO:0030170
Dod05g0797 245 Hamap Pyridoxal phosphate homeostasis protein. 13 237 IPR011078 GO:0030170
Dod05g0797 245 ProSitePatterns Uncharacterized protein family UPF0001 signature. 82 96 IPR011078 GO:0030170
Dod05g0797 245 PIRSF YBL036c_PLPDEIII 5 244 IPR011078 GO:0030170
Dod05g0797 245 SUPERFAMILY PLP-binding barrel 14 236 IPR029066 -
Dod05g0797 245 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 22 238 IPR011078 GO:0030170
Dod05g0797 245 Pfam Alanine racemase, N-terminal domain 30 238 IPR001608 -
Dod05g0797 245 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 7 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0797 Dod-Chr5 12720086 12723368 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0797 K06997 - gmx:100793309 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0797 05 12720086 12723368 Dod05g0797 05 12720086 12723368 ECH