Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0687 ATGTCTCTCAGCATTCTTCGATCGCGATCCATTTCCTTCGCATCCAAACGCCTCCTCTGCACCACCAATCCCGCTTCCGCATCAGCTTCAGCTTCGGATCCGCCACCTTTATCGGAGCCACGCAGACGCTGGAGCTTCCTCAAGTTCGCCGTCGCCGGTGCACTCACAGGAGCCACTGCCGCCGCCGGTTACGCCACTTACGCTTACAGTTTGAACGAAATAGATGACAAAACGAGGTCTTTCCGCGAATCAGTGAAGTACAGTCCAGGTGATGGAGCTACTGCCCTCGATAAATTTCAAGGGTTGCTATACTCTACAGCAATGAAAGTGCCTGCTAAAGCAATAGAGCTTTATTTGGATGCAAGAAGGTTAATTGAAGAACAAATTCAGAGTTACACTGAACCATATGCGGACAAGCTCCTTCCAGATTTGCTTCCTAATGAGCAACATGTGTTTACACTTGTTCTAGATCTCAATGAGACATTGATTCACTATATATGGACACGAGAGACAGGCTGGCAGACATTTAAGAGGCCTGGTGTTGATGCTTTCTTGGAACATCTAGCACAGTTTTATGAAATTGTTGTGTATACTGATGAACAAAATATGTTTGTCGATCCTGTTTTAGATAGGCTGGACACCAAGCATTGTATAAGATATAGGCTATCCAGGCCAGCTACCAAGTATCAAGATGGGAAACATTTCAGAGACCTTTCAAAATTAAACAGAGATCCAGCAAAAGTTCTCTATTTAAGTGGCCATGCTTTCGAAAGTTGCCTTCAACCTGACAACTGTGTTCCTATTAAGCCATGGCAGCATAATGATAAAGATGACACAGGTCTTTTGGATTTCATACCGTTTCTTGAGTTTGTTGCCTGTAGTAGTCCAGCTGATATAAGACCGGTGCTAGCATCTTACCAGGGATGTGAGATTCCAGCTGAATTCATTAGGCGTTCCAAAGAACATCAGAGTTCATCAAATCATCGGTAA 990 0.4434 MSLSILRSRSISFASKRLLCTTNPASASASASDPPPLSEPRRRWSFLKFAVAGALTGATAAAGYATYAYSLNEIDDKTRSFRESVKYSPGDGATALDKFQGLLYSTAMKVPAKAIELYLDARRLIEEQIQSYTEPYADKLLPDLLPNEQHVFTLVLDLNETLIHYIWTRETGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVLDRLDTKHCIRYRLSRPATKYQDGKHFRDLSKLNRDPAKVLYLSGHAFESCLQPDNCVPIKPWQHNDKDDTGLLDFIPFLEFVACSSPADIRPVLASYQGCEIPAEFIRRSKEHQSSSNHR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0687 329 Gene3D - 136 321 IPR023214 -
Dod05g0687 329 PANTHER OS05G0513200 PROTEIN 22 324 - -
Dod05g0687 329 Pfam NLI interacting factor-like phosphatase 153 300 IPR004274 -
Dod05g0687 329 ProSiteProfiles FCP1 homology domain profile. 147 291 IPR004274 -
Dod05g0687 329 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 22 324 - -
Dod05g0687 329 SMART forpap2 150 278 IPR004274 -
Dod05g0687 329 SUPERFAMILY HAD-like 140 304 IPR036412 -
Dod05g0687 329 CDD HAD_FCP1-like 152 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0687 Dod-Chr5 10307516 10313269 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0687 K17496 - gmx:100803155 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0687 05 10307516 10313269 Dod05g0687 05 10307516 10313269 ECH