Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0683 ATGGGTGAGGAAGAATCAGTGAATGAAGTTTCCCAGGCGGACTCAAATGGCAAGAGCATACCAGAGAAGATTGTAGATGAAGTGACAGAAAAGAAGGATTTGGAAACTGATGGAGGAAAGGTCTTGGAGAATAATAGAGTCAAACAGTTGAAAGGAGACAGCATAAAAGAAATTGATGAAGAGAAGAACGCTGATGGTGTGGGAGAGGCTGAAGGGGATAAAAAGGTTGGTTGTGTGGAAGGAGTAAAAGAGGACAAGAAAGATGGTCGCGCAGAAGTAAAAGGGGATAAGGGAGTTAATGGTCTGGAAGAAATAAAGGAGGATAAGGAAGTTGCTGGTGTCAAAGAAGGAAAGGGGGATAAGGAAGTTGATGGTGTGAAGGAAGTTTTAGAGGATAAGAAAGATGACTGTGGACTTGAGAATGAGAAAACGGATGCAGACACTGTGGTTAAGAAAATTAGGGAGAGTAAGGAAGTAAAGGAAAAAGTTGAAGCTGAGAAACCAGAAGTGGATGGAATGGAAGTTGATGGTAGCACTGAAGACATGGAGGAGAACAGTAAAAAGGAGAAAACTGAAGCTGAGATGGAGGAGGAGAAGGAGGAGGATGAAGATGACATTGATAAGTCAAAAGAAGATAAGCCAAAAGATAGCAAGGATGGGAAAGGATTGAAAAAGCGTAGGACAAGGAAGATCAGTGGGGAGAAAGTGACAGATAAAAGGAAGGAACTGAAGAAGACAGAGCCAAGGACTCCTACTATTGATCGTCCTGTTCGGGAAAGGAAATCAGTTGACAGGTTGGTAGCATCAATCGACAAGGATGCAACCAAAGAATTTCACATCGAAAAGGGTCGTGGTACACCTTTAAAAGATATACCGAATGTTGCTTTTAAATTATCTAGAAGGAAGACTGATGATACTTTCAAATTGCTCCATACAATCCTCTTCGGAAGGAGAGGGAAGGCAATTCAGATAAAGAGTAATATATCAAGGTTTTCTGGTTTTGTGTGGCATGACAATGAGGAAAAGCATATGATCAAAGTTAAAGAAAAGTTTGACAAGTGTAATAAAGAGAAGCTACTGGAATTCTGTGATATGCTTGACATAACATTTGCCAAGGCAACAACAAGGAAGGAAGACATTGTTTCTAAGCTGATAGACTTTTTGGTTGCTCCTCATGCAACCACTACTGTGCTACTTGCCGAAAAAGAGAAGTCAAGTAAGGGCAAAAAACGTAAGCGCGTTCTGAGACGAGGTTCATCAAGATCTGGGCCAACAACTTCAAGACGTGCTGCTAAGAGTCAGAAGAAAAATGAAGATTCTTCGCCAGGTGAGGAGAGAAAGAGTACAACTGACACAGAACATGAGTCAGAGGACGAAGAGAAAGACAAAGAAAATGAGGAGGAAAATGATAATGGTATTCCTGACAAATCTGAGGATGATAAACCAGAGAAATCTGAAAGTGAGGAGAAAATTGATTCTGGAAGCGAGTCTGAAGATGATAAAAAAAGGAAAAAAACTTCAAAAGTATCATCCACAAAGAAAGAATCTGCTGCAAAAAGTAAAACCGAGAAAATTACAGTTACCAAAAAGTTGCGGTCACCACCAAAGAGAACACCTAAGAAATCATCTACCCGCACCCAGTTTGATGATGATACTGATGGAAGTCCAAAGGTCTTTTCAAGAAAGAAGCAAAATGAAAAAGGTGGAAAGCAGAAGATGTCAACTCCTCCTACTAAGTCTGCTCCCAAAGAGAAAGCTGAAAAGGTTGGTAAAGGAAAGGGCAAGAAGAAAGAGAAGTTGAGCCCCACTGATGATCAATTGCGCGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACAGCCACATTTACTGACATTCTGAAGCAACTTGCTAAACAATTTGATATGGATCTCACCCCAAGAAAAGCATCCATAAAGGTCATGATTCAGGAGGAGCTGACAAAGCTAGCTAATGAAGCCGATGATGACGACGAAGAAGAGGATGCTGATAAAGATGAAACCCAACCCACTGGTCAGGAGGTTGAAACCTGA 2058 0.4077 MGEEESVNEVSQADSNGKSIPEKIVDEVTEKKDLETDGGKVLENNRVKQLKGDSIKEIDEEKNADGVGEAEGDKKVGCVEGVKEDKKDGRAEVKGDKGVNGLEEIKEDKEVAGVKEGKGDKEVDGVKEVLEDKKDDCGLENEKTDADTVVKKIRESKEVKEKVEAEKPEVDGMEVDGSTEDMEENSKKEKTEAEMEEEKEEDEDDIDKSKEDKPKDSKDGKGLKKRRTRKISGEKVTDKRKELKKTEPRTPTIDRPVRERKSVDRLVASIDKDATKEFHIEKGRGTPLKDIPNVAFKLSRRKTDDTFKLLHTILFGRRGKAIQIKSNISRFSGFVWHDNEEKHMIKVKEKFDKCNKEKLLEFCDMLDITFAKATTRKEDIVSKLIDFLVAPHATTTVLLAEKEKSSKGKKRKRVLRRGSSRSGPTTSRRAAKSQKKNEDSSPGEERKSTTDTEHESEDEEKDKENEEENDNGIPDKSEDDKPEKSESEEKIDSGSESEDDKKRKKTSKVSSTKKESAAKSKTEKITVTKKLRSPPKRTPKKSSTRTQFDDDTDGSPKVFSRKKQNEKGGKQKMSTPPTKSAPKEKAEKVGKGKGKKKEKLSPTDDQLRDAICEILKEVDFNTATFTDILKQLAKQFDMDLTPRKASIKVMIQEELTKLANEADDDDEEEDADKDETQPTGQEVET* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0683 685 SUPERFAMILY DEK C-terminal domain 596 655 - -
Dod05g0683 685 Coils Coil 179 212 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 231 253 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 1 37 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 659 675 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 658 685 - -
Dod05g0683 685 PANTHER PROTEIN DEK 147 670 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 581 605 - -
Dod05g0683 685 PANTHER DEK PROTEIN 147 670 IPR044198 GO:0003677|GO:0006325
Dod05g0683 685 Coils Coil 449 469 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 542 569 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 431 456 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 20 37 - -
Dod05g0683 685 Gene3D - 594 657 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 132 194 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 206 221 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 132 253 - -
Dod05g0683 685 MobiDBLite consensus disorder prediction 467 530 - -
Dod05g0683 685 Pfam DEK C terminal domain 602 655 IPR014876 -
Dod05g0683 685 MobiDBLite consensus disorder prediction 401 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0683 Dod-Chr5 10209323 10218284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0683 K17046 - gmx:100818537 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0683 05 10209323 10218284 Dod05g0683 05 10209323 10218284 ECH