Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0678 ATGCAGCAGCTCCGGCCGGCGACTCTGGCTGCGCTTGCGGCAGCGATGCTCCTCATCGCCGCCACAACCACCCGCGCGCACAACATCACGCGGATTCTGGCTACGCACCCTGAGTTCTCCACCTTCAACCACTACCTAACCCTAACGCACCTTGCCCCGGAGATCAACAGCCGCACCACCATAACCGTCTGCGCCATCAACAACGCCGCCATGGACGAGCTCCTCGCGAAGCACCCGTCCATCTACACGCTCAAGAACATCCTCTCCCTCCACGTCCTCCTCGACTACTTCGGGGCCAAGAAGCTCCACCAGATCACCAACGGCACCGCCCTCGCCGCCACCATGTTCCAGGCCACCGGCACCGCCCCCGGATCCGCCGGCTTCGTCAACATCACCGACCTCCGCGGCGGAAAGGTTGGCTTCGGTGCCGAGGACAATGACGGCACGCTCTCCGCCGTGTTTGTCAAGTCCATCCAGGAGCTCCCTTACAACATCTCCGTCATACAGATCAGCAAGGCACTCCCTTCCCCCGCAGCCGAAGCCCCTACACCCGCACCCAGCCAGAAAAACCTCACCACCATTATGTCCCGCCATGGCTGCAAGGTCTTCGCCGACACCCTCTCCGCCTCTGCCGAAGCGCAGAACACCTTCGCCGACAGTGTCGATGGCGGATTAACAGTCTTCTGCCCCATGGATGATGCCTTCAAGGCATTCCTGCCGAAGTATAAGAACCTTACTGCGGCGGGGAAGGCGGAGTTGCTGGAGTACCATGCTACGCCGGTGTACCAGTCCATGGCTATGCTCAAGTCCAACAATGGATTGATGAACACCCTTGCTACTGATGGCGCCAGCAAATTCGATTTCACAGTGCAGAATGAGGGTGAACAAGTGACGCTGAAGACAAAGATCGTCACGGCGAAGATCACGGGAACTCTCATTGACGAGCAGCCGTTGGCGATCTACACCATTGACAAGGTTCTTCTTCCGAGGGAGCTCTTCAAGGCCGAGGCTCCGTCTCCGGCGCCGGCGCCGGCGCCTGAGCCCGCTGCGGCGGACGCGCCCGCCTCCCCCAAGAAAGGGGGCACGAAGAAGAAGAAGAAGAAGAAGGCGGATGCGCCTGCCGATGCGGAATCTGCGCCAGCTGATTCGCCAGGTGATGCGGCCGATGAGAGCGCCGACGACAGTAACGGTGCCGTTAGGCTTGACGGCGCTAGGTACGTTAACGTTATTGTCACGGTCATTGCTTTGTGCTTTGGGTTTTCACTGCTGTGA 1272 0.6006 MQQLRPATLAALAAAMLLIAATTTRAHNITRILATHPEFSTFNHYLTLTHLAPEINSRTTITVCAINNAAMDELLAKHPSIYTLKNILSLHVLLDYFGAKKLHQITNGTALAATMFQATGTAPGSAGFVNITDLRGGKVGFGAEDNDGTLSAVFVKSIQELPYNISVIQISKALPSPAAEAPTPAPSQKNLTTIMSRHGCKVFADTLSASAEAQNTFADSVDGGLTVFCPMDDAFKAFLPKYKNLTAAGKAELLEYHATPVYQSMAMLKSNNGLMNTLATDGASKFDFTVQNEGEQVTLKTKIVTAKITGTLIDEQPLAIYTIDKVLLPRELFKAEAPSPAPAPAPEPAAADAPASPKKGGTKKKKKKKADAPADAESAPADSPGDAADESADDSNGAVRLDGARYVNVIVTVIALCFGFSLL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0678 423 ProSiteProfiles FAS1/BIgH3 domain profile. 187 327 IPR000782 -
Dod05g0678 423 Gene3D FAS1 domain 169 330 IPR036378 -
Dod05g0678 423 Gene3D FAS1 domain 24 168 IPR036378 -
Dod05g0678 423 SUPERFAMILY FAS1 domain 32 174 IPR036378 -
Dod05g0678 423 MobiDBLite consensus disorder prediction 336 396 - -
Dod05g0678 423 Pfam Fasciclin domain 200 329 IPR000782 -
Dod05g0678 423 Pfam Fasciclin domain 37 107 IPR000782 -
Dod05g0678 423 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 6 406 - -
Dod05g0678 423 SMART fasc_3 62 177 IPR000782 -
Dod05g0678 423 SMART fasc_3 226 330 IPR000782 -
Dod05g0678 423 ProSiteProfiles FAS1/BIgH3 domain profile. 26 174 IPR000782 -
Dod05g0678 423 SUPERFAMILY FAS1 domain 183 330 IPR036378 -
Dod05g0678 423 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 406 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0678 Dod-Chr5 10139771 10141724 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0678 - - lang:109350304 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0678 05 10139771 10141724 Dod05g0678 05 10139771 10141724 ECH