Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0676 ATGGCAGTCTCAACTAGTCCAGCACCACAATTAGGGGACCGGTTGTGTGAAAATGGATTTGAATGTGTTAAAATTCTACCTGCCATCAATGATGCCCATGGAGGAGTCATTGTTGACTTGAAGGAGCCTATGGACTCTGAAGTTTTTGCTACTTTGCTTAGGTCTTCACTTCTACAATGGAAGCAACAGGGAAAAGATGGTGTTTGGATCAAGTTACCTATCAGTCTTGTTAATCTTGTTGAAACTGCAGTTAAGGAGGGATTCTGGTACCACCATGCTGAGCCAAGCTATCTAATGCTAGTTTACTGGATTCCTAAGAACGGCTGCACAATCCCTCCAAATGCTTCCCACCGTATTCGAGTTGCTGCTATAGTCTTGAGTGATAAGAAAGAGGTGCTTGTAGTCCAGGAAAAAAGAGGCAGATTCCATGGGATTGGCTATTGGAAGTTACCTACTGGAGTAGTTGATGTGGGTGAGGAGATTTTTGCGGCAGCTATTAGAGAAGTAAAGGAAGAGACAGGAGTTGATACAGAATTTGTGGAAGTATTAGCATTCAGAGAGGTGCAAAATTCATTCTTTGGGAAATCAGATTTGTGTTTTGTTTGCATCCTGAGTCCTCTTTCTTTTGACATCAAAAAGCAAGACTTGGAAATTGAGGCAGCTCAGTGGATGCCATTGGAGGAATTCGCTGTACAACCTTTTACTCAGAAGCACGAGCCCTTCAAGTATGCAGCTGAATTATGCCGGGCAAAGGTGGAAGGAAGGGCCTATGCTGGATTCTCTCCACGGCTTGTCTCATCATATTTTGAGGACTTGAATTATATATACTTGAATAGCCGTGACCTGGACAAGTCTTCTTCTTAA 864 0.4294 MAVSTSPAPQLGDRLCENGFECVKILPAINDAHGGVIVDLKEPMDSEVFATLLRSSLLQWKQQGKDGVWIKLPISLVNLVETAVKEGFWYHHAEPSYLMLVYWIPKNGCTIPPNASHRIRVAAIVLSDKKEVLVVQEKRGRFHGIGYWKLPTGVVDVGEEIFAAAIREVKEETGVDTEFVEVLAFREVQNSFFGKSDLCFVCILSPLSFDIKKQDLEIEAAQWMPLEEFAVQPFTQKHEPFKYAAELCRAKVEGRAYAGFSPRLVSSYFEDLNYIYLNSRDLDKSSS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0676 287 ProSiteProfiles Nudix hydrolase domain profile. 117 248 IPR000086 -
Dod05g0676 287 PANTHER NUDIX HYDROLASE RELATED 19 285 IPR003293 -
Dod05g0676 287 PANTHER NUDIX HYDROLASE 2 19 285 - -
Dod05g0676 287 Gene3D - 15 108 - -
Dod05g0676 287 SUPERFAMILY Nudix 84 245 IPR015797 -
Dod05g0676 287 Pfam Nudix hydrolase domain 27 104 IPR040618 -
Dod05g0676 287 Pfam NUDIX domain 117 241 IPR000086 -
Dod05g0676 287 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 202 226 IPR003293 -
Dod05g0676 287 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 76 94 IPR003293 -
Dod05g0676 287 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 114 132 IPR003293 -
Dod05g0676 287 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 118 249 - -
Dod05g0676 287 ProSitePatterns Nudix box signature. 153 174 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0676 Dod-Chr5 10128461 10135473 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0676 - - gmx:100783941 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0676 05 10128461 10135473 Dod05g0676 05 10128461 10135473 ECH