Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0629 ATGATGTCTTCCCCCAATCAACCCCAGCATCAACAACAACCACAACAACAACCACCACCACCCTTCGATATGCACTCTTTCTTCAACCCAAACCAAAACCCAAACCCTAACCCTAACCCTAACCCCAACCCCAACCCCACCGCCCCATTCCCACCCTCCTCCTCCTCCTCCTACCCTCCACCCTTCTCCGCCGCCACAACCCCCTTCCACCACCACCTCCTCCACCAGCACCCCCACCCCCACCCCTTCCCCTTCGACCACCAGCCTCTCCAAAACCACCACCGCTCAGTCTCCTTCCCCACCCCTCCCCTCCAACCCCCACCTCCCCCAACGACGACCACCACCTCCTCCTCCTCCCCCAACGCCGGCGCCCGCCTCATGGCCCTCCTAACCCACCACGAACAACAGCAACAACCACCTCAACAACCTCCCCAACCGCTTGTAACTGCCCCGGCCATGGGGATGCTGACGGCCGCGAACGCCGCGGCGGCCGCGCTGATTCGACTGCCGAGCAACAAGGTGCCGAAGGGCAGGCACCTGGCGGGGGACCACGTGGTGTATGACGTGGACGTGAGGATGCCTGGGGAGGTGCAGCCGCAGCTTGAGGTTGCACCGATCACGAAATACGGGTCGGATCCTAACTTGGTTTTGGGAAGACAGATCGCGGTCAACAAGTCTTACATTTGCTATGGGTTGAAGCAAGGGAACATTAGGGTTCTTAATATTCACACTGCTGTTAGGTCACTCCTCAAAGGCCACAATCAGAGGGTTACGGACTTGGCTTTCTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGAACAGACAGCCGTGTCTGTGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCCTCAAATTACTGCCAATGTTGTTATTGCTGTCCAAATGGTGGGAGAGGAGAAAGTTGAAAATCCTCGAATTTGCTGGCACTGCCACAAGCAAGAGATTTTGGTAGTTGGTATGGGAAAACATGTTCTAAGAATTGACACCACAAAAGTAGGAAATGGCGAAGCCTTTGTGGCAGAGGACCCTCTTAGATGTCCTGTTGACAAGCTCATTGATGGGGTTCAGCTGGTAGGCACACATGATGGGGAGGTGACTGATTTGTCAATGTGCCAATGGATGAGAAATCGTTTGGTATCTGCATCACAGGATGGCACGATAAAGATTTGGGAAGATCGCAAGGCACAACCACTTGCGGTGTTGCGACCACATGATGGCAATCCTGTTTTTTCTGCTACATTTTTTACTGCTCCGCAAAAGCCTGATCATATTGTTCTTATCACAGGAGGACCACAAAATCGAGAGGTGAAGCTTTGGGTCTCAGCAAGTGAAGAAGGTTGGCTACTCCCAAGTGATGCTGAATCATGGAAATGCACTCAGACGTTGGAGTTGAGGAGTTCAGCTCAACCATCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGTCGCATGCGGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCACTTAGAATATGGTTCTAATCCTGAATCAACACGAATGGATTATATAGCTGAGTTTACCGTGACCATGCCCATTTTGAGTTTTACTGGGACAAGTGATATATTACCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAGACACAGGCCATTCAGCAGTATGCCTTGGATTTAGCCCAGTGCTTGCCTCCGCCCATGGATAACGTGGGACTAGAGAAGTCAGATTCCACTGTTTCCCGAGATGCAATCAGTGCTGAAGGATTCCCCATCACTATAGACTCATCTGGAGGTAGAACATCTGAAACATCTTTAGCCAGTTCTGCTCCCAAAACAATGACGCAAGCCAGTGGCACTGAGAGTGTCGGGAGATACCCTTTAAGCTCTGGCCATATTGAGTCACCTACTTCTAAAGAAATCAGTTATTCAAACACTGAAGGTAAGCCTGTTACATTGGCTTCATCCGGTAGTGATGCTGATATTGTGTGTGTTCCATCTCCACCTCTTCCTTTAAGCCCAAGGTTGTCTAGGAAACTGTCTGATTTTAGGAATCCACAATCTAATCTGGGCGATCATGTTGGGGACCAACCCATTAATGATTATTCAGTTGACAGACAAATGGCTTCCATTCATAGGAACTTGTCTGATGTACCTTCATTGAATAATGATTCAAAGAATGATGAGAAGGTTAAGCAGGATGAAATTTCTAGTGTACTTAATACTTCTGTTATGTTTAAGCAACCAACTCATCTGGTTACACCGTCTGAAATCATAAAGGCTGGCTCTTCCCCTGAGACTAATATAATTGATAGAAAGAGTGAGGGAGACACAAAGATCCAGGATGTTGTTGATATGGGCAATGCTGAAGTGGAAGTGAAAGTGGTGGGTGAGGCAACATCTGATCAAAGTGATGAATTTGGCCGGCAGGGGCCACAACAAAACCTAGTTACTGAGGGTAAAGAAAAATTCTTTTGCTCTCAGGCGTCAGATCTTGGAATTGAGATGGCGCGAGAATGCTGTGCAATATCTGGGGAAACTTATATTACAGAGGAACCTGGGCAAGTTGATCCTAATGTAGGGGAATCACTGACCCAACCTCCTAATGTGAGTGAGGATGGGCTCCAAGACCTAACAAAAGATGTACACGAAAAGGTTTCTGACTCATCTGCATCCATGACTGTACCACCTTCTCCTGCTCCTAATACAAAAGGGAAGAGACAGAAGGGCAAAAATTCTCAAGCTTCAGGTCCATCTTCTCCTTCTCCAAGTGCCAACAATTCAACCGATTCATACAATGAGCCAAGTGGAAGTTCAAACCTCCCATCTACTGAAAATGCATTTCATCAAATTCTAGCCATGCAAGAATCATTTAATCAGTTATTGACAATGCAAAAAGATATGCAGAAACAAATGACAATGATGATTGCAGTTCCAGTTACAAAAGAAGGTAGAAGGCTTGAGGCAGCCCTGGGGAGAAGCATGGAGAAAGCTGTCAAGGCCAACACTGATGCTTTGTGGGCTCGAATTCAAGAGGAGAATGCTAAAAATGAAAAGTTGCTACGAGAACGTATTCAGCATGTTACAGGTTTGATTAGTAATTTCATGAACAAGGATTTGCCAGCAATATTGGAGAAAACGGTGAAGAAGGAAATAGCTTCAGTTGGGCCAGCTGTAGTCCGAGCAATGTCTCCTGCTGTTGAGAAAATAATATCTTCAGCTATTGTGGAGTCTTTCCAGAGAGGAGTGGGTGATAAGGCAGTAAATCAACTTGATAAATCAGTTAGTTCAAAACTTGAAGCTACTGTAGCAAGGCAAATCCAAGCACAGTTTCAGACAACTGGCAAACAGGTGCTTCAGGATGCACTCAAATCCAGTTTTGAAACATCAGTGGTTCCTGCATTTGAGATGTCATGCAAAGCAATGTTTGAGCAAGTAGATGCTACATTTCAGAAAGGCATGGTTGAACATTCAACTGCAATGCAACAACGCCTTGAGTCTGGCCACACTTCATTGGCGATGACGCTAAGGGATTCCATTAATTCAGCATCATCAGTTTCTCAAACCTTGAGCAGAGAAGTGCTAGAGGGCCAGAGAAAGCTAGTGGCACTTGCAAATGCAGGGTCAAACTCGGGCACAATAAATCCTTTGCCTATCCAGATAAACAATGGTCCCTTACTTCATGAAAAGGTTGAGGTGCCTCTAGATCCCAAACAGGAGCTAGCAAGGTTGATAGCTGAACGGAAGTATGAGGAGGCTTTCACAGGAGCTTTGCAGAGAAGTGATGTGTCCATTGTATCTTGGTTATGTTCTCAGGTTGATTTACATGGACTCTTGTCAATGGTTCCTCTCCCTCTGAGCCAAGGAGTGGTGCTTTCACTTTTGCAGCAGTTGGCATGTGATATCAACAACGATCCGACACGAAAGCTGGCATGGATGACAGATGTGGCTGCTGCCATAAATCCCTCAGACCCCATGATCACAATGCATGTGCGACCCATCTTTGAGCAAGTTTATCAGATACTGAATCATCAACGTAGCTTGCCTACGATGACTGGAGCTGATCAATCAAGCATCCGTCTTTTATTGCATGTCATCAACTCAATGCTCATGACATGTAAATGA 4161 0.466 MMSSPNQPQHQQQPQQQPPPPFDMHSFFNPNQNPNPNPNPNPNPNPTAPFPPSSSSSYPPPFSAATTPFHHHLLHQHPHPHPFPFDHQPLQNHHRSVSFPTPPLQPPPPPTTTTTSSSSPNAGARLMALLTHHEQQQQPPQQPPQPLVTAPAMGMLTAANAAAAALIRLPSNKVPKGRHLAGDHVVYDVDVRMPGEVQPQLEVAPITKYGSDPNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLASVGTDSRVCVWKISEGPDDEDKPQITANVVIAVQMVGEEKVENPRICWHCHKQEILVVGMGKHVLRIDTTKVGNGEAFVAEDPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMRNRLVSASQDGTIKIWEDRKAQPLAVLRPHDGNPVFSATFFTAPQKPDHIVLITGGPQNREVKLWVSASEEGWLLPSDAESWKCTQTLELRSSAQPSLKDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPMDNVGLEKSDSTVSRDAISAEGFPITIDSSGGRTSETSLASSAPKTMTQASGTESVGRYPLSSGHIESPTSKEISYSNTEGKPVTLASSGSDADIVCVPSPPLPLSPRLSRKLSDFRNPQSNLGDHVGDQPINDYSVDRQMASIHRNLSDVPSLNNDSKNDEKVKQDEISSVLNTSVMFKQPTHLVTPSEIIKAGSSPETNIIDRKSEGDTKIQDVVDMGNAEVEVKVVGEATSDQSDEFGRQGPQQNLVTEGKEKFFCSQASDLGIEMARECCAISGETYITEEPGQVDPNVGESLTQPPNVSEDGLQDLTKDVHEKVSDSSASMTVPPSPAPNTKGKRQKGKNSQASGPSSPSPSANNSTDSYNEPSGSSNLPSTENAFHQILAMQESFNQLLTMQKDMQKQMTMMIAVPVTKEGRRLEAALGRSMEKAVKANTDALWARIQEENAKNEKLLRERIQHVTGLISNFMNKDLPAILEKTVKKEIASVGPAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQVLQDALKSSFETSVVPAFEMSCKAMFEQVDATFQKGMVEHSTAMQQRLESGHTSLAMTLRDSINSASSVSQTLSREVLEGQRKLVALANAGSNSGTINPLPIQINNGPLLHEKVEVPLDPKQELARLIAERKYEEAFTGALQRSDVSIVSWLCSQVDLHGLLSMVPLPLSQGVVLSLLQQLACDINNDPTRKLAWMTDVAAAINPSDPMITMHVRPIFEQVYQILNHQRSLPTMTGADQSSIRLLLHVINSMLMTCK* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0629 1386 SUPERFAMILY WD40 repeat-like 216 482 IPR036322 GO:0005515
Dod05g0629 1386 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 202 516 IPR032401 -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 607 665 - -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 1 121 - -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 692 706 - -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 603 710 - -
Dod05g0629 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 411 IPR001680 GO:0005515
Dod05g0629 1386 Gene3D - 1298 1385 IPR044938 -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 100 114 - -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 863 955 - -
Dod05g0629 1386 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 27 1386 IPR045152 GO:0031087
Dod05g0629 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 292 IPR001680 GO:0005515
Dod05g0629 1386 MobiDBLite consensus disorder prediction 871 885 - -
Dod05g0629 1386 SMART WD40_4 365 402 IPR001680 GO:0005515
Dod05g0629 1386 SMART WD40_4 243 283 IPR001680 GO:0005515
Dod05g0629 1386 SMART WD40_4 405 451 IPR001680 GO:0005515
Dod05g0629 1386 MobiDBLite consensus disorder prediction 33 58 - -
Dod05g0629 1386 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 27 1386 - -
Dod05g0629 1386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 287 - -
Dod05g0629 1386 MobiDBLite consensus disorder prediction 900 955 - -
Dod05g0629 1386 Gene3D - 207 556 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0629 Dod-Chr5 9418281 9432128 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0629 K12616 - gmx:100798228 2033.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0629 05 9418281 9432128 Dod05g0629 05 9418281 9432128 ECH