Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0301 ATGGACATGTCAGATGCAGTGATTGTCAAATCTAGTAGGCTGAAGTCTGTTGTATGGAATGATTTTGATAGGATAAAAAAAGGCGATACCTGTGTGGCTATTTGTAGGCATTGTAAAAAGAAATTGAGTGGATCAAGTACCAGTGGAACATCACATTTAAGGAACCACTTAATCAGGTGTCAGAGAAGATCTAACCATGGGATAGCAGCACAGTACTTTACACCGAGAGAAAAGAGAAAGGAAGGGACTCTTGCAATTGCCAATTTCAATTTAGATCAAGATCAGAACAGAGATGATACCCTTAGCCTTGTGAATATTAAATTTGAGCAGACACAGTTGAAAGATGACTCTGTCAACACTGGAACTAGTAGCTTTGATCAAAGACGGAGTAGATTTGACCTTGCTCGGATGATTATCCTACATGGATATCCATTGGCTATGGTTGAGCATGTCGGTTTCAAAGTTTTCATAAAAAATCTACAGCCATTGTTTGAGCTTGTGACGTTGAATAGGGTTGAGGCTGATTGTATTGAGATTTATGAAAACGAGAGAAAAAAGATGAGTGAGGTGTTAGATAAATTACCTGGGAAAATCAGCATAAGTGTTGATGTGTGGACTGATGTGGGTGATGCTGAGTATTTGTGCTTGACAGCAAATTACATAGATGAATCATGGCAGCTAAGAAGGAGGATTTTAAATTTTATAAGGATTGACCATTGTCATACTGAAGACATGCTTTCAGAAACTATCATGACTTGTCTGATGGATTGGGATATTGACCGCAAGTTGTTCTCCTTGATATTGGATAGTTGTTCTGCCTGTGATAACATTGCTAACAGAATCAGTGAGAGACTTTCGCAAAACAGGTTTCTTTATTGTAATGGTCAATTATTTGATATACGCTGTGCTGCAGATGTTCTTAATGTCATGGTTCAGCATGCTTTGGGAGCTGTAAGTGAAATAGTGGATAAGATCCGAGAAACTATTCGTTATATTAAAAGTTCACAGACTGTTCAGGCAAAGTTCAATGCGATGGCCAAAGAAGTTGGGGTCCTGAGTCAGAAGTGCCTATTTCTAGATAATCCATTGCAATGGAATTCCACATATTCAATGCTGGAAGTTGCCTTAGAATTCAGGGACATTCTCATTCTTTTGCAAGAAAATGACACCGGCTACAGAACCTGTTTGTCAGATGTAGACTGGGAGAGAGTCACTACGGTTACTAACTGCTTGAAGCTATTTGTTGAGGTTATAAATGTTTTCACAAAGAACAAGTGTCCAACTGCAAATATATATTTCCCTGAACTCTGTGACGTTAAGTTGCATCTGCTTGAATGGTGCAAGAACTCAGATGAATTTCTCAGTTCTTTGGCGTTAAGATTGCGGAGCAAGTTTGATGAATATTGGGAGAAGTGTAGCTTAGGGTTGGCAGTTGCAGCCATGCTAGACCCTAGATTCAAGATGAAGTTGGTAGACTATTACTATCCACAAATCTATGGAAGCTTGTCTGCTGGTCGCATCGAAGAGGTCTTTGAGGGCGTGAAGGCTCTCTACAATGAGCATTCAATAGGCTCCCCATTAGTTTCTCATGATCAAGGTTTGTCCTGGCAAGTTGGCAATGGCCCACTCTGCATACCAGATTCTGTGAAGGACTCCAGGGATAGACTGATGGGGTTCGACAAATTTCTTCATGAAACTTCTCAGGGTGAAGGTGTAAAATCAGATCTAGAAAAGTACTTAGAAGAACCTCTCTTTCCACGTAATGTCGATTTCAACATATTAAACTGGTGGAGAGTTCACACTCCCAGGTATCCCGTCTTATCCATGTTGGCGCGAAATGTTTTAGGGATTCCAATGTCTAAAGTCACACCGGAATTGGCATATAACAAGAGTGGAAGAGTCCTTGATCGTGATTGGAGCTCGCTCAATCCTGCTACAGTCCAAGCTCTGCTGTGTTCACAAGATTGGATACGGAGTGAACTGGAAAATTAG 1992 0.4046 MDMSDAVIVKSSRLKSVVWNDFDRIKKGDTCVAICRHCKKKLSGSSTSGTSHLRNHLIRCQRRSNHGIAAQYFTPREKRKEGTLAIANFNLDQDQNRDDTLSLVNIKFEQTQLKDDSVNTGTSSFDQRRSRFDLARMIILHGYPLAMVEHVGFKVFIKNLQPLFELVTLNRVEADCIEIYENERKKMSEVLDKLPGKISISVDVWTDVGDAEYLCLTANYIDESWQLRRRILNFIRIDHCHTEDMLSETIMTCLMDWDIDRKLFSLILDSCSACDNIANRISERLSQNRFLYCNGQLFDIRCAADVLNVMVQHALGAVSEIVDKIRETIRYIKSSQTVQAKFNAMAKEVGVLSQKCLFLDNPLQWNSTYSMLEVALEFRDILILLQENDTGYRTCLSDVDWERVTTVTNCLKLFVEVINVFTKNKCPTANIYFPELCDVKLHLLEWCKNSDEFLSSLALRLRSKFDEYWEKCSLGLAVAAMLDPRFKMKLVDYYYPQIYGSLSAGRIEEVFEGVKALYNEHSIGSPLVSHDQGLSWQVGNGPLCIPDSVKDSRDRLMGFDKFLHETSQGEGVKSDLEKYLEEPLFPRNVDFNILNWWRVHTPRYPVLSMLARNVLGIPMSKVTPELAYNKSGRVLDRDWSSLNPATVQALLCSQDWIRSELEN* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0301 663 Pfam Domain of unknown function (DUF4413) 423 521 IPR025525 GO:0003677
Dod05g0301 663 Pfam BED zinc finger 16 66 IPR003656 GO:0003677
Dod05g0301 663 SUPERFAMILY beta-beta-alpha zinc fingers 16 62 IPR036236 -
Dod05g0301 663 PANTHER BED FINGER-RELATED 2 660 IPR045259 -
Dod05g0301 663 Pfam hAT family C-terminal dimerisation region 575 657 IPR008906 GO:0046983
Dod05g0301 663 SMART bed5 13 63 - -
Dod05g0301 663 ProSiteProfiles Zinc finger BED-type profile. 13 66 IPR003656 GO:0003677
Dod05g0301 663 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 2 660 - -
Dod05g0301 663 SUPERFAMILY Ribonuclease H-like 185 659 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0301 - - gmx:106799808 1176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0301 05 3783752 3791306 Dod05g0301 05 3783752 3791306 ECH