Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0280 ATGAGTTCCCAAACACATAACAGCAGCAGCGTTCACAAACCCACAACAAAAGCCACACCAAAACCCACAACACCACACGCCTCCTCCTCATCAAGAACCACAACGACACCCTCATCTTTTTCTTCTTCTTCTTCGAATCACATTGCTATGGTGGAGCTGAAGCAGAGGATCCTAACCTCAATCTCAAAGCTCTCCGACAGGGACACTCACCAGATCGCAATCGAGGACCTCGAAAAGACCATTCTGACCCTCTCACCAGAATCCATCCCAGTCATCCTCAACTCCCTATACGACGCCGCATCGGCCGACCCCAAACCCCAAGTCAAGAAGGACTCCCTCCGCCTCCTCACCTTCGTCTGCTCCTCCCACCCGGACGCCGCCGCCCCTCACCTCACCAGGATCATCGCCGCCGTCGTCCGCCGCCTCAAGGACTCCGACTCCGCCGTCCGCGAGGCCTGCCGCGACGCCGTCGGAGCACTCGCCAGCCAGTATTTGAGAGGAGGGGGAGGAGGAGGGGGCAATGGTGGTGGTGATACTGGTGGTGGAGTTGGTTCGGTTGTGGCGTTGTTTGTGAGGCCGTTGTTTGAGGCGATGGGAGAGCAGAACAAAGGAGTGCAGGCTGGTGCTGCCGCGTGTTTGGCGAAGATGGTGGACTGTGCCGCCGCCGCCGGCGGTGGTAGTGGTTTGCCGGTGGTGGCGTTCCAGAAGCTGTGCCCTAGGATCTGTAAGATGCTGGGAAGCCCTAATTTCTTGGCGAAGGCTGCGATCTTGCCTGTTGTTGCAAGCTTGTCACAGGTTGGAGCAATTACACCACAAAGCTTGGAACATTTGCTGCCCAGCATTCATGACTGCCTTTCCAGTACTGATTGGGCAACACGTAAAGCAGCAGCTGATGCATTAAGGTCCTTGGCTTTGCACTCAAGGAGTTTGGTTGCAGATAGAGCAGCATCCACCGTGGCAGTACTTGAGGATTGCAAGTTTGACAAGATAAAACCTGTGAGAGAGAGCATGACAGAGGCATTGCAATTGTGGAAAAATATTGCAGGGAAAGGAGATGGATCCCTTGATGATTCAAGGCCCGTGACTGGTGATGATGAGAATGCAGATGCAGCTCCATTGACAGAAGCAGGTGAAAAATTAAATCTTGGTGAGAGAAGGTCTGATCCTTCAGCAAAGGATTCATCCACTGGTAAAGCAGCTGGCATCTCAGAGAAGGCAGTTGTAATATTAAAAAAGAAAGCGCCTGCCTTAACTGATAAAGAATTGAACCCAGAATTTTTCCAGAAACTTGAACGAAGGGGATCAGATGATTTACCAGTAGAAGTAGTTGTTCCTCGTAGAGGCCTCAATTCTTCTAGCTCAAACAATGAGGAAGAATTGGGGGCAAATGCTAAAGATTCTAAAGAAAGAATAAGTTCTGTTGGAAACATCCCCAGTCACATCACAGAGAGAGGCAATGATGGAAATTTGAAACAACAGAGTTTCAGCAATTTTGCCCCTGACAAATACTCAGAAAAGAGAGTGAATGCAAAAGAACTGAGGGCTAAAGCATATGATACTGATGATAGGACTGACATTGATCAGAGGGAGGGTTCTGCCAATCTTGCAGGTTTTTCTAAAACTGATGGTCAATCTGAAGTATCATTCTCCAATAACAGAGGCAACTGGTTGGCCATCCAGAGGCAGTTACTGCAGCTTGAAAGACAACAGGTTCATTTGATGAACATGCTGCAGGATTTCATGGGTGGATCTCATGATAGCATGGTTACTCTAGAGAATAGAGTTCGAGGTCTTGAGAGAATTGTTGAAGATATGGCACGAGATTTATCTATATCATCTGGTCGTAGAGGTAGTAACTTTACAGGGTTTGAGGGATCTTCTAGTAGGCCTACTAGCAAGTATAATGGTTTTAATGACTATTCCAGTTCCAAGTATGGAAGAGGTGGTGATGGACGTATACCATTTGGTGAAAGATTTTCCCAATCTGACGGAAATGCGTTGGGTATGAGGGGAAGAGGGCCATCTTGGAGATCTGATGTGTCTGAGGGATTGGATTTTCCTGGGTATGGTGCTTCTAGAAATGGACAGATCTCCTCAAGGAGGGCTTTTGGTGGTGGTTCTGTTGATGGACGATCACCAAAATCAGTGCCTGAAGGTGATCAAGGGGGCAGCAGGAGAGCTTGGGATAAAGCAGCACTGCCCATCCGGCTTGGTGAGGGGCCTTCTGCAAGAAGTGTCTGGCAAGCTTCTAAGGATGAAGCTACCTTGGAAGCAATTCGGGTGGCTGGGGAGGACAATGGAACATCTCGAGCAACAAGAGTAGCAATCCCTGAAATGACTGCAGAAGCTCTGGCTGATGACAATGTTGGGCAAGAGAGGGATCCCATCTGGACTTCTTGGAGTAATGCAATGCATGCCCTTCAAGTGGGTGATATAGATTCAGCCTTTGCAGAAGTATTGTCCACTGCAGATGATCTTTTGCTTGTAAAACTAATGGATAGAACGGGCCCTGTATTTGACCAACTTTCAAGTGAGATTGCATGTGAGATCTCGTCTGCCATTGGACAATTCTTACTGGATCAGAACCTGCTTGATATCTGTTTGTCTTGGACTCAACAGTTGGTGGAGATAGTATTGGAGAATGGCCCTGATACCTTTGGGATTCCAATGGATCTGAAGAAAGAGCTCTTGCTGAATTTACATGAAGCTTCATCGGCAGATCCAGCTGAGGAATGGGAAGGCGTACCGCCAGATCAACTTTTGTTGCAGTTGGCGTCAGCCTGGGAAATTGACCTGCAACAGCATGACAAATAA 2814 0.4847 MSSQTHNSSSVHKPTTKATPKPTTPHASSSSRTTTTPSSFSSSSSNHIAMVELKQRILTSISKLSDRDTHQIAIEDLEKTILTLSPESIPVILNSLYDAASADPKPQVKKDSLRLLTFVCSSHPDAAAPHLTRIIAAVVRRLKDSDSAVREACRDAVGALASQYLRGGGGGGGNGGGDTGGGVGSVVALFVRPLFEAMGEQNKGVQAGAAACLAKMVDCAAAAGGGSGLPVVAFQKLCPRICKMLGSPNFLAKAAILPVVASLSQVGAITPQSLEHLLPSIHDCLSSTDWATRKAAADALRSLALHSRSLVADRAASTVAVLEDCKFDKIKPVRESMTEALQLWKNIAGKGDGSLDDSRPVTGDDENADAAPLTEAGEKLNLGERRSDPSAKDSSTGKAAGISEKAVVILKKKAPALTDKELNPEFFQKLERRGSDDLPVEVVVPRRGLNSSSSNNEEELGANAKDSKERISSVGNIPSHITERGNDGNLKQQSFSNFAPDKYSEKRVNAKELRAKAYDTDDRTDIDQREGSANLAGFSKTDGQSEVSFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMARDLSISSGRRGSNFTGFEGSSSRPTSKYNGFNDYSSSKYGRGGDGRIPFGERFSQSDGNALGMRGRGPSWRSDVSEGLDFPGYGASRNGQISSRRAFGGGSVDGRSPKSVPEGDQGGSRRAWDKAALPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTSRATRVAIPEMTAEALADDNVGQERDPIWTSWSNAMHALQVGDIDSAFAEVLSTADDLLLVKLMDRTGPVFDQLSSEIACEISSAIGQFLLDQNLLDICLSWTQQLVEIVLENGPDTFGIPMDLKKELLLNLHEASSADPAEEWEGVPPDQLLLQLASAWEIDLQQHDK* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0280 937 MobiDBLite consensus disorder prediction 613 730 - -
Dod05g0280 937 Coils Coil 588 608 - -
Dod05g0280 937 Gene3D - 40 166 IPR011989 -
Dod05g0280 937 SMART TOG_3 76 336 IPR034085 -
Dod05g0280 937 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 41 937 IPR033337 GO:0005874|GO:0008017
Dod05g0280 937 MobiDBLite consensus disorder prediction 448 470 - -
Dod05g0280 937 SUPERFAMILY ARM repeat 57 348 IPR016024 -
Dod05g0280 937 MobiDBLite consensus disorder prediction 613 642 - -
Dod05g0280 937 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 41 937 - -
Dod05g0280 937 Gene3D - 177 331 IPR011989 -
Dod05g0280 937 MobiDBLite consensus disorder prediction 1 45 - -
Dod05g0280 937 MobiDBLite consensus disorder prediction 352 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0280 Dod-Chr5 3544547 3550190 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0280 - - adu:107477481 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0280 05 3544547 3550190 Dod05g0280 05 3544547 3550190 ECH