Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3147 ATGTCCCTCCGCAGCGACACCATTGACCGCCGGAGAGTGGCGTCGCCGGCCATCAGAAACGCCGTCCCGGGCGGCGGGAATGCCGTTTCCGGCGGCGGAAGCGGTGGCGCGGCGGGGGGCTCGGGGAAGGCGGCTTCGAGGCAGAGGCTGAGGGTGAATCCGATCAGGGATCACGTGCCGGAATCGTACGATGACTTGGAATTGGATTTCAGCCCTTCGATTTTCAGCTCCCTTGAGAAGCACCTTCCGACGAACATGCTCAGGGCTCCTCGAAACGATAAGGTCAAGTACATCAGCGGCATTCTCCTCGACTACCTTCCCCCCTCTGCCAGGATAAGGGATCAAAAGCACAGTGAATACAGACAGAGGATACTATCAAATTATCAGCCTCTGCATCAAGAGTTGTACACCATGAATCCAACAGCATTCTTTGTCCCAGCATTTCTGAAAGCAATTAGAGATAATACAGAACGCAGCTTTAAAAATATAATATCCGAGCCCTCCCCAGGCATTTTTACATTTCAAATGCTTCGGACACACTTTTGTGAATTATTGTTGTCTGAGGTTGAAAACTTTGAGAGGTGGGTTCATGAAACAAAATTTCAGATTATGCGTCCCAATACAATGAATAAGTATGGTGCTGTACTTGATGACTTCGGCCTTCAAACTATGCTTGCCAAGTTTATGGAAGGTTTTATCAGTCCTTTGTCTAAAGTGTTCTTTGCAGAACTTGGTGGATCAACCCTGGATTCTCATCATGGGTTTATTGTTGAGTATGGTCAAGATAGAGATATTGACTTAGGCTTCCATGTGGATGACTCAGAAGTAACTTTGAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAACTGTTTTTTCGGGGTATGCGATGTGATAAACATGTCCATACAGAAAGTGTTTCAGAGGAGATCTTTGATTATTCTCATGTCCCTGGACAAGCTGTGCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCTACTACATCTGGCCATCGGGTCAACCTTGTTCTGTGGTGTAGAAGCTCTGCTTTTAGAGAGCTGAAAAAGTACAAGTCAGATTTCTCTAGCTGGTGTGGTGTGTGCACTCGTGAGAAGAAAGGAAAGGAGCTCACAAAAATTGAGAACACCAGATTGGATTTGTTCCCCAGGGAAGGCGAAGCAACTGCATGA 1194 0.4724 MSLRSDTIDRRRVASPAIRNAVPGGGNAVSGGGSGGAAGGSGKAASRQRLRVNPIRDHVPESYDDLELDFSPSIFSSLEKHLPTNMLRAPRNDKVKYISGILLDYLPPSARIRDQKHSEYRQRILSNYQPLHQELYTMNPTAFFVPAFLKAIRDNTERSFKNIISEPSPGIFTFQMLRTHFCELLLSEVENFERWVHETKFQIMRPNTMNKYGAVLDDFGLQTMLAKFMEGFISPLSKVFFAELGGSTLDSHHGFIVEYGQDRDIDLGFHVDDSEVTLNVCLGKQFSGGELFFRGMRCDKHVHTESVSEEIFDYSHVPGQAVLHHGRHRHGARATTSGHRVNLVLWCRSSAFRELKKYKSDFSSWCGVCTREKKGKELTKIENTRLDLFPREGEATA* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3147 397 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 43 395 - -
Dod04g3147 397 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 250 349 IPR005123 -
Dod04g3147 397 SUPERFAMILY Clavaminate synthase-like 210 358 - -
Dod04g3147 397 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 43 395 - -
Dod04g3147 397 MobiDBLite consensus disorder prediction 1 53 - -
Dod04g3147 397 Gene3D q2cbj1_9rhob like domain 168 349 - -
Dod04g3147 397 SMART p4hc 169 348 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3147 Dod-Chr4 55167909 55176774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3147 - - qsu:111987273 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3147 04 55167909 55176774 Dod02g3705 02 75787266 75793462 PCT