Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3072 ATGAAGAGTAATAAGCAGCAAGAACGCTCCTCTGCCTCTGCATATCAAAGGCTCTTCAGTGCTAGTTCTCAACAACTCCATCTCTCCACCGTGTTCTCTCATGTTATACTCTTTGCCTCCGGATTGCTCATTGGCCTCACCCTCGCTCTCTCTCTAAAACACTTCTTCCCCCACTTTCAATTCCACCAACAACAAGTTGTCCTCCCATCTTTGCCTGCAGCTTCTGATCCCAATAATCCCATTATTATTTCACCATCAAATGTTTCAGTATCATCACATAACCATACAAAAGTCACCATCACCACTTCCACCCGTCGTGTTGGGTTGAGGGGTTTCCTGAACCCGCCAAAGGCAGTGCATGATATGACTGAGGAAGAGTTGTTGTGGAGAGCTTCTTTGGTTCCTAGGATCCGGGAAAACCCATTCAAACTCACCCCAAAGGTTGCATTCATGTTTCTGACAAGAGGGCCTGTGTTTTTGGCCCCTCTTTGGGAGAGATTCTTCAAGGGAAATGAAGGCTTGTATTCTATCTTCGTCCATTCACATCCTTCTTTCAATCAAACAGTCCCAGAGAGTTCTGTGTTTCATGGCCGCAGAATCCCAAGCAAGGGTGTAAGGTGGGGTGACTTCAACATGATAGGGGCAGAGAGGCGTCTACTAGCAAATGCACTGCTTGACTTCTCCAACCAACGTTTTGTTCTGCTCTCAGAGTCATGCATTCCTTTGTTCAATTTCTCAACCATCTACAACTACCTCATGAACTCAACCAAGACTTATGTGGAAGCCTATGATCTCCCAGGCCCTGTGGGGCGTGGCAGGTACAGCCCCAGAATGAGGCCACTTGTTAAGCTCTCTCAGTGGAGGAAGGGCTCCCAATGGTTCCAGATAGACCGTGCCCTTGCCCTTGAGATTGTCTCTGACCAGCTATACTACCCAGTGTTCAAGAACCACTGCAGGCATGGATGCATTGGTGATGAGCACTACTTGCCCACATTAGTTAGCATCAAATTTTGGAGGAGGAACTCAAATAGAACCTTGACTTGGGTTGATTGGTCAAGGGGTGGATCTCATCCATCAAGGTATATGAGAACAGATGTAACTATTAGTTTCTTGAAGAGGCTAAGGCATGGAAGCAGGTGTCACTACAATGGGAAGACCACCAATATCTGTCATTTGTTTGCAAGAAAGTTCATGCCTCAAGCTCTTGATAGACTGCTGAGGTTTGCTCCACCGGTAATGCAATTCAATTGA 1251 0.4652 MKSNKQQERSSASAYQRLFSASSQQLHLSTVFSHVILFASGLLIGLTLALSLKHFFPHFQFHQQQVVLPSLPAASDPNNPIIISPSNVSVSSHNHTKVTITTSTRRVGLRGFLNPPKAVHDMTEEELLWRASLVPRIRENPFKLTPKVAFMFLTRGPVFLAPLWERFFKGNEGLYSIFVHSHPSFNQTVPESSVFHGRRIPSKGVRWGDFNMIGAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYNYLMNSTKTYVEAYDLPGPVGRGRYSPRMRPLVKLSQWRKGSQWFQIDRALALEIVSDQLYYPVFKNHCRHGCIGDEHYLPTLVSIKFWRRNSNRTLTWVDWSRGGSHPSRYMRTDVTISFLKRLRHGSRCHYNGKTTNICHLFARKFMPQALDRLLRFAPPVMQFN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3072 416 PANTHER CORE-2/I-BRANCHING ENZYME 7 415 - -
Dod04g3072 416 Pfam Core-2/I-Branching enzyme 148 374 IPR003406 GO:0016020|GO:0016757
Dod04g3072 416 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 7 415 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3072 Dod-Chr4 54436129 54439395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3072 - - gmx:100815747 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3072 04 54436129 54439395 Dod04g3072 04 54436129 54439395 ECH
Dod04g3072 04 54436129 54439395 Dod02g3659 02 74897175 74902213 PCT