Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2862 ATGGGACTAAAGTTGAATGTGATCCTTTTTCTTCTCAGGTTTGAAGATAAGGAAGTTCAAAGAGACATGAAGCTCGTTCCTTATAAGATTGTGAACAAGGATGGAAAACCCTACATTCAGGTAAAAATCAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTCTGACTAAGATGAAGGAAACAGCTGAAGCATTCCTCGGGAAGAAAATTCACGATGCTGTGGTCACTGTCCCTGCTTACTTCAATGATGCTCAGAGGCAGGCCACAAAGGATGCTGGTGTCATTGCCGGTATGAATGTTGCTAGGATTATTAATGAACCCACTGCTGCTGCCATCGCCTATGGTTTGGACAAGAAAGGTGGTGAGAAGAACATCCTTGTCTTTGATCTTGGTGGTGGGACATTTGATGTCAGTATCTTGACAATTGATAATGGTGTTTTCGAGGTTCTTGCAACAAATGGAGATACTCATCTTGGAGGTGAGGACTTTGACCAGAGAATAATGGAGTACTTCATTAAATTGATAAAGAAAAAGCATGGAAAGGATATTAGCAAGGACAACAGAGCACTTGGCAAGCTCAGGAGAGAGGCTGAGCGTGCTAAGAGAGCTCTCAGCAGCCAGCACCAGGTCCGTGTGGAAATTGAATCACTCTTTGATGGTGTTGATTTCTCTGAGCCACTTACCCGTGCTCGGTTTGAGGAATTGAACAATGACTTGTTCCGGAAGACAATGGGGCCTGTGAAGAAGGCAATGGAAGATGCTGGACTACAGAAGAGTCAGATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTACAACAGCTTTTGAAGGACTACTTTGATGGAAAGGAGCCAAACAAGGGTGTCAACCCTGATGAGGCAGTTGCCTATGGTGCTGCAGTTCAAGGAAGCATTTTGAGCGGAGAAGGTGGTGAAGAAACCAAAGATATCCTTCTTCTGGATGTGGCTCCACTCACCCTTGGAATTGAAACTGTTGGTGGGGTGATGACAAAGCTGATTCCCAGAAATACTGTTATCCCTACCAAGAAATCTCAGGTTTTCACCACCTACCAGGATCAGCAGACTACTGTCTCCATTCAGGTATTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGGCTACTTGGGAAATTTGATCTGTCTGGAATTCCACCAGCTCCAAGAGGCACCCCTCAAATTGAAGTGACCTTTGAAGTTGATGCAAATGGCATTCTAAATGTCAAGGCTGAAGACAAGGGCACGGGTAAATCAGAGAAGATCACCATTACAAATGAGAAGGGACGCCTGAGCCAGGAGGAAATTGAGCGTATGGTTCGTGAGGCAGAAGAGTTTGCTGAGGAAGACAAGAAGGTCAAGGAGAGGATTGATGCTCGTAATGGCCTTGAAACCTATGTCTACAACATGAAAAACCAGATCAGCGACAAAGACAAGCTTGCTGACAAGTTGGAGTCTGATGAGAAGGAGAAAATTGAGGCTGCAGTGAAAGAAGCCTTGGAATGGCTGGATGACAGCCAGACCGCGGAGAAAGAAGAATACGAGGAGAAGCTCAAGGAAGTTGAAGCCGTTTGCAATCCAATTATCACTGCTGTCTATCAGAGATCGGGTGGAGCCCCAGGTGGTGGTGCATCAGGTGAGGACGAGGATGATTCTCACGATGAGCTCTAG 1716 0.4575 MGLKLNVILFLLRFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIHDAVVTVPAYFNDAQRQATKDAGVIAGMNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQISDKDKLADKLESDEKEKIEAAVKEALEWLDDSQTAEKEEYEEKLKEVEAVCNPIITAVYQRSGGAPGGGASGEDEDDSHDEL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2862 571 Coils Coil 451 471 - -
Dod04g2862 571 MobiDBLite consensus disorder prediction 549 571 - -
Dod04g2862 571 ProSitePatterns Heat shock hsp70 proteins family signature 2. 133 146 IPR018181 -
Dod04g2862 571 SUPERFAMILY Actin-like ATPase domain 13 124 IPR043129 -
Dod04g2862 571 PANTHER HEAT SHOCK PROTEIN 70KDA 11 557 IPR013126 GO:0005524|GO:0140662
Dod04g2862 571 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 322 479 IPR029047 -
Dod04g2862 571 PANTHER LUMINAL-BINDING PROTEIN 11 557 - -
Dod04g2862 571 Coils Coil 485 505 - -
Dod04g2862 571 ProSitePatterns Heat shock hsp70 proteins family signature 3. 270 284 IPR018181 -
Dod04g2862 571 Gene3D - 13 314 - -
Dod04g2862 571 PRINTS 70kDa heat shock protein signature 407 423 - -
Dod04g2862 571 PRINTS 70kDa heat shock protein signature 139 149 - -
Dod04g2862 571 PRINTS 70kDa heat shock protein signature 299 319 - -
Dod04g2862 571 PRINTS 70kDa heat shock protein signature 267 283 - -
Dod04g2862 571 PRINTS 70kDa heat shock protein signature 79 99 - -
Dod04g2862 571 PRINTS 70kDa heat shock protein signature 326 345 - -
Dod04g2862 571 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 473 556 IPR029048 -
Dod04g2862 571 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 321 475 IPR029047 -
Dod04g2862 571 Gene3D - 476 550 IPR029048 -
Dod04g2862 571 Coils Coil 189 209 - -
Dod04g2862 571 Gene3D Actin; Chain A, domain 4 165 248 - -
Dod04g2862 571 Gene3D - 125 299 - -
Dod04g2862 571 SUPERFAMILY Actin-like ATPase domain 127 318 IPR043129 -
Dod04g2862 571 Coils Coil 519 539 - -
Dod04g2862 571 Pfam Hsp70 protein 13 549 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2862 Dod-Chr4 52496854 52500914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2862 13 571 Miscellaneous Gene Families AT5G42020 92.513 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2862 K09490 - gmx:547839 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2862 04 52496854 52500914 Dod04g2862 04 52496854 52500914 ECH