Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2853 ATGGCTTCGTGTTCGCTTACTTCAATTCTTCTCTCATCTTCTTCCTCTTCTTCCCTTTCCTCCAAACCTCTCTCCGCTTCCTTATCTCCTCCTCCACCCTCCGCATTCTCTTGCGCCCTCAAACCTCTCTTTTACCAAAAGAGAACTGATTCTGGGTTTCCCATCAAAGCCCAAACCCTCGACTTCTCTGCCTCGTTCTTCGAAGGTGGTGGATTCGGGTCGGAGGACGACCCCATTTCTTCCGGGCCCGGTTTCACTGCTACCGAGCCCAAGGACGAACCTGAATGCCCTCCCGGGCTCAGACAGTACGAAACCATGGCCGTTTTGAGGCCCGACATGTCCGAGGATGAGAGACTCGCACTCACCCAGAAGTACGAGGAGCTGCTTGTTGCTGGAGGTGCAATGTATGTGGAGGTTTTTAACAGAGGAGTTATTCCTCTAGCATATAGCATCAGGAAGAGAAACAAGGCAGGGGAGACCAATACTTATCTGGATGGCATCTACCTGCTGTTCACCTACTTCACCAAGCCTGAGTCAATAAATATTCTTGAGGAGACACTGCTGGCTGATGATAATGTTATCAGGTCTTCCACTTTCAAAATTAGGAAAAGGAAATATTAA 621 0.4911 MASCSLTSILLSSSSSSSLSSKPLSASLSPPPPSAFSCALKPLFYQKRTDSGFPIKAQTLDFSASFFEGGGFGSEDDPISSGPGFTATEPKDEPECPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNKAGETNTYLDGIYLLFTYFTKPESINILEETLLADDNVIRSSTFKIRKRKY* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2853 206 CDD bS6_chloro_cyano 100 201 - -
Dod04g2853 206 Gene3D - 99 206 IPR014717 -
Dod04g2853 206 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 17 206 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Dod04g2853 206 MobiDBLite consensus disorder prediction 13 33 - -
Dod04g2853 206 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 17 206 - -
Dod04g2853 206 Hamap 30S ribosomal protein S6 [rpsF]. 100 203 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Dod04g2853 206 Pfam Ribosomal protein S6 102 200 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Dod04g2853 206 SUPERFAMILY Ribosomal protein S6 100 204 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2853 K02990 - gmx:100305490 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2853 04 52418391 52419616 Dod04g2853 04 52418391 52419616 ECH