Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2838 ATGACGATGGCTGATTTTGCTTTGAGTTCAATTCACAGAGAGCCGGTACAGTGGGAAGACCAACCGGGACATATCTCTAGTGAGCCAATCCTGATTTACCTCACAGTGGACGGTGCTGTGACCCCAATGCGTGTGTTGGAGACTGATTCCATTGCTTCAGTGAAACTGAGGATTCAGAAGTGCAAAGGCTTTGTGGTGAAGAAGCAGAAGCTGGTTTATGGTGGCAGAGAGTTGGCACGCAATGATACACTCGTCAAGGACAATGGTGTCACTGATGGCAATGTTCTTCATCTGGTTCTTCGCCTCTCTGATCTTCTTCTCGTCACTGTGAGCACCACTTGTGGCAAGGAATTTGAATTTCATATTGACAGGAATAAAAACATTGGGGGGAATGTTTCGTTGATCTTGAGGATCAAGAGCTTTTTTGCAATTGATGAGAAGCTTGATGACCAGAGACTCTTTCATGAAATATGCAAGGGTGATAATGATGTGATTCATTATTTGATAATTAGGAAATCCGATAAGGTTAGAACTACACCAATGCACAAAGATTTGAAGCTTTTGGTCGAGGCATCTACATCTAGCGATGATAGTACAGATCAAAGAATACAAGTAGGAAATAATAGGACTAATAAAATTGAGGTGCCAAATGTACCACCTGGTGTTGTGAATCCTAAAATCGACTTTTTGCCTTTCATCTGGGACCTGATCAACAGCACATTGGAAGGTTTGATGAAAGGCAATCGCCCTATAAGGTCCTCAGAGGGCATTGGTGGGACTTCCTTCATGCAAGACTCATCAGGTGAGGAGCATGTTTCAGTTTTCAAGCCCATGGATGAGGTACCAATGGCTGTGAACAACCCAAGACGGCTACCAAGTTCATCGAATGGTGAATGTTTGAAAAAAGGGACAAAGGTGGGAGAAGGAGCATTGAGGGAAGTTGCAGCTTACTTATTGGATCATCCAAGGGGTGGCCCACGTTTGGTGACTGGTGAAGCAATAGGCTTTGCTGGTGTTCCCCCTACTAGTATTGTCCAATGA 1041 0.4409 MTMADFALSSIHREPVQWEDQPGHISSEPILIYLTVDGAVTPMRVLETDSIASVKLRIQKCKGFVVKKQKLVYGGRELARNDTLVKDNGVTDGNVLHLVLRLSDLLLVTVSTTCGKEFEFHIDRNKNIGGNVSLILRIKSFFAIDEKLDDQRLFHEICKGDNDVIHYLIIRKSDKVRTTPMHKDLKLLVEASTSSDDSTDQRIQVGNNRTNKIEVPNVPPGVVNPKIDFLPFIWDLINSTLEGLMKGNRPIRSSEGIGGTSFMQDSSGEEHVSVFKPMDEVPMAVNNPRRLPSSSNGECLKKGTKVGEGALREVAAYLLDHPRGGPRLVTGEAIGFAGVPPTSIVQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2838 346 Pfam Phosphatidylinositol 3- and 4-kinase 256 338 IPR000403 -
Dod04g2838 346 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Dod04g2838 346 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 1 346 - -
Dod04g2838 346 SMART ubq_7 30 101 IPR000626 GO:0005515
Dod04g2838 346 Gene3D - 34 104 - -
Dod04g2838 346 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 247 346 IPR000403 -
Dod04g2838 346 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
Dod04g2838 346 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 346 IPR044571 -
Dod04g2838 346 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2838 Dod-Chr4 52328262 52329362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2838 1 346 Acyl Lipid Metabolism Gene Families AT2G46500 48.753 2.47e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2838 - - lja:Lj0g3v0307289.1 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2838 04 52328262 52329362 Dod04g2838 04 52328262 52329362 ECH