Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2834 ATGGCGTCTGAGAGGGAAGCTTTTGACCTCGCAGGACCGTTGCATCTAACTTTTGTCCAGTGGGATAATCCATATCATCGAATGTCAGTAGCTGCTAGTTTGGTCCAAGGTGTTTACATTCTAGAAAGGGACCGGCAAGAAAAACGTGAAGGCCCAGATGCTCTTGCACTGCCTTGGTGGGCATTCTTCCACTTTCAGTTGCTTCGTCCACTTGTAGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAAGCCTCCACCATCTCAGTGCAATGACACTTTATATGGAAGTCCTCGTTACGTGGTTGCCTTTCGAGGGACTCTAACCAATTCAGGCTCAGTTTCACGTGATATTGAGTTGGATATCCACTTTATCCGACAAGGGCTGCATAAAACTTCTCGCTCTGACATAGCTACTCAAGCTGTTCGAAACATGGTAGCAACCGTAGGTGATTCAAATGTTTGGTTGGCCGGGCACTCCCTAGGATCAGCAATGGCATTGCTTACTGGGAAAACCATGGCAACCAGTGGCATATTTATTGAATCTTTTCTTTTCAACCCACCATTTACATCTGCTCCACTAGAGAGCATTAAGGACGAGAGATTGAAACATGGGATTCGAATTGCTGGCAGTGTGATAACAGCTGGACTCACCCTTGCTATGAAAGCCAAGACCAAGCAGCAGGAGCAGCATAGGGACTTGTCTGTTGATACATTTGCTGCTTTGGCTGCCTGGGTCCCAGGTTTATTTGTGAACCCATCTGACCATATCTGCTCAGAGTATGTTGGATACTTCGAGCACAGAAGAAAAATGGAGGAGATTGGAGCAGGAGTCATTGAAAGGTTAGCAACTCAAAACTCACTTGGTGGCCTGCTGATGAGTGCGTTTGGGAAGGAATCTGAACCCTTACACCTCATTCCTTCAGCCTCTCTGACAGTTAATGTTACTCCTGTAAATGATTTCAAAGAAGCCCATGGTATTCACCAGTGGTGGAAACCTGACTTGCGTCTGGATCACAAGGTCTACAATTACAAATAG 1047 0.4575 MASEREAFDLAGPLHLTFVQWDNPYHRMSVAASLVQGVYILERDRQEKREGPDALALPWWAFFHFQLLRPLVDDVDSSIFGAIYEFKPPPSQCNDTLYGSPRYVVAFRGTLTNSGSVSRDIELDIHFIRQGLHKTSRSDIATQAVRNMVATVGDSNVWLAGHSLGSAMALLTGKTMATSGIFIESFLFNPPFTSAPLESIKDERLKHGIRIAGSVITAGLTLAMKAKTKQQEQHRDLSVDTFAALAAWVPGLFVNPSDHICSEYVGYFEHRRKMEEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASLTVNVTPVNDFKEAHGIHQWWKPDLRLDHKVYNYK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2834 348 PANTHER LIPASE CLASS 3-LIKE 2 347 - -
Dod04g2834 348 SUPERFAMILY alpha/beta-Hydrolases 13 198 IPR029058 -
Dod04g2834 348 Gene3D alpha/beta hydrolase 84 207 IPR029058 -
Dod04g2834 348 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 347 - -
Dod04g2834 348 Pfam Lipase (class 3) 139 180 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2834 Dod-Chr4 52315845 52319375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2834 1 280 Acyl Lipid Metabolism Gene Families AT2G05260 58.596 1.63e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2834 - - gmx:100812620 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2834 04 52315845 52319375 Dod04g2834 04 52315845 52319375 ECH
Dod02g1180 02 14602034 14604600 Dod04g2834 04 52315845 52319375 PCT