Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2813 ATGGAGATGATGAATAGCAACAGCAAGAGCAAGAGCAACAGCGAAAGCGAATTGGTGAGGCTTTGCATAGAGTCGGCATGTGAGAGCAGAGACAGCGTCGATAAATGGCGGAGGCAGAGGCGCACCCTCGACCGCCTCCCTTCCCCTCTCGCTGACGCCCTCCTCCGCCGCCTCTTCACCCGCCGCCTCCTCTTCCCCTCTCTGCTCGAGGTTTTCAAACAGAGCGCTGAAGAGGTTGATGTGAGTGGCGACAACTCAGTGGATGCTGAGTGGATGGCGTATTTGGGAGCATTTCGCCACTTGCGCTGCTTGAACCTCGCCGATTGCCATCGAATCACCACTTCTGCTCTTTGGCCTATTACAGGAATGAGTAGCCTTAAGGAGTTGGACCTCTCAAGGTGCTTGAAGGTCAATGATGCTGGAATTAACCACATTCTTTCTATATCGAATCTGGAGAAGTTAAGCATTTCTGAAACAGGCGTCACGGCCAAAGGAGTCAAACTCCTCGCCTCTCTTAAAAACTTGTCTCTTCTTGATTTGGGTGGCTTACCCATTGATGACATCTTATTAAGTAAATTACAGGTACTGAAAAAGCTACAGTATCTTGATATCTGGGGTAGTAAAGTATCAAATGATGGTGCGGCTGTTCTCAATATGTTCCCCAAGTTAACCTATCTAAATCTTGCTTGGACCAATGTTACAAAATTGCCTAGTTTATCAGCTCTTGAATGCCTGAACATGAGTAATTGTACTATTGATTCTATACTTGAAGATGATAAAGCTCCTTTGGCAAAACTTACTCTCTCTGGGGCTACATTCGTGAATGAAGCCAATGCCCTATTACATGCAAATACAAATTTCCTGTCCTTTCTGGATGTAGCCCATTCTGGCCTTAGCAGATTCTTCTTCTTAAGTAAAATGAGAGTACTAGAACATCTCAATCTCAGCTCATGCATGGTCACTGATGATTCAGTTGAGATAATTGCATCTGTTGGTGGAAACTTGAAAAGTCTGAATCTGAATGGTACTAAGGTTACCTCTGCTGGCTTAGAGATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTATCATTATCTCAGACACTGCTGGATGACACTGCCATCTCATTTATCAGCATGATGCCTTCATTAAAGGTTGTCGACCTGAGCAATACAAACATAAAAGGTTTTTTGCACCAGGAAGGGACCCACCTGGACTCGCCACTCTCTCTAACTGCTCTGGAAAGTCTTAAACAATTAGAAAAGTTGAATTTGGAGCTCACGCAAGTTAGGGATGAAGCTTTATATCCTTTATCAAGCTTCCAAGAGCTGAGACATTTATCTCTTAAAAGTGCTTCACTTGCAGACATCTCACTTTACTATTTATCATCAATTCCTAAACTGACCAGCCTTAGTATTGGTGATGCGGTATTGACAAATTATGGGCTTGATATGTTTAAACCTCCTGAAACTCTTGAACTGATGGACCTCCGAGGTTGTTGGCTCTTAACTAAGGACACTATCACGTCATTCTCTAGAATTTATCCACAAATTGAAGTAAAGCATGAACTTGTTACCATATTTCCTTCTGATAAAAATGGACTTAATCATTCCTCTCCATCTCGATTAACTTTAAGGACTATGCAAGTGGCTAAGAAACAAGAACAGATGTCCTTAACTCCAGATTTTATAGATCAAAGATTGAAGTATAGCAGGGAGGAATTGCTTGCATTGCAATTCATGTCTTTGCCTCTTGCATCAAATAGTGAGAGTGACCATTCAATATCCGAGAAACTGTTGAATTGA 1806 0.4247 MEMMNSNSKSKSNSESELVRLCIESACESRDSVDKWRRQRRTLDRLPSPLADALLRRLFTRRLLFPSLLEVFKQSAEEVDVSGDNSVDAEWMAYLGAFRHLRCLNLADCHRITTSALWPITGMSSLKELDLSRCLKVNDAGINHILSISNLEKLSISETGVTAKGVKLLASLKNLSLLDLGGLPIDDILLSKLQVLKKLQYLDIWGSKVSNDGAAVLNMFPKLTYLNLAWTNVTKLPSLSALECLNMSNCTIDSILEDDKAPLAKLTLSGATFVNEANALLHANTNFLSFLDVAHSGLSRFFFLSKMRVLEHLNLSSCMVTDDSVEIIASVGGNLKSLNLNGTKVTSAGLEILAGHVPNLEILSLSQTLLDDTAISFISMMPSLKVVDLSNTNIKGFLHQEGTHLDSPLSLTALESLKQLEKLNLELTQVRDEALYPLSSFQELRHLSLKSASLADISLYYLSSIPKLTSLSIGDAVLTNYGLDMFKPPETLELMDLRGCWLLTKDTITSFSRIYPQIEVKHELVTIFPSDKNGLNHSSPSRLTLRTMQVAKKQEQMSLTPDFIDQRLKYSREELLALQFMSLPLASNSESDHSISEKLLN* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2813 601 PANTHER F-BOX/LRR-REPEAT PROTEIN 13 14 595 - -
Dod04g2813 601 SUPERFAMILY L domain-like 411 508 - -
Dod04g2813 601 SMART LRR_CC_2 441 465 IPR006553 -
Dod04g2813 601 SMART LRR_CC_2 172 196 IPR006553 -
Dod04g2813 601 SMART LRR_CC_2 307 331 IPR006553 -
Dod04g2813 601 SMART LRR_CC_2 332 356 IPR006553 -
Dod04g2813 601 SMART LRR_CC_2 123 148 IPR006553 -
Dod04g2813 601 Gene3D Ribonuclease Inhibitor 164 261 IPR032675 -
Dod04g2813 601 PANTHER RECEPTOR-LIKE PROTEIN 14 14 595 - -
Dod04g2813 601 Gene3D Ribonuclease Inhibitor 20 161 IPR032675 -
Dod04g2813 601 SUPERFAMILY L domain-like 283 283 - -
Dod04g2813 601 Gene3D Ribonuclease Inhibitor 263 402 IPR032675 -
Dod04g2813 601 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Dod04g2813 601 SUPERFAMILY RNI-like 84 396 - -
Dod04g2813 601 Gene3D Ribonuclease Inhibitor 403 582 IPR032675 -
Dod04g2813 601 Coils Coil 413 433 - -
Dod04g2813 601 Pfam Leucine Rich repeat 124 142 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2813 - - gmx:100814174 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2813 04 52164906 52168869 Dod04g2813 04 52164906 52168869 ECH