Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2800 ATGAGGACGGACTATATGAAGAACAATTTTCCCTTAAACCACAGGAACTTTCTCATCAAGTTGGCCCTTTCCATCTTCTTCTTTGGCCTTGCTTTTCGCCTTCTTTTCTTTCGTTCCCTGTCCCCTCAGATTTCCACAGTTTTGGATACCCCTTTTCCTGAGAGGACCACTGATTCAGAACCCCAACAAGACCCACCTGTTCCACCACAGGTTCCTGAGAATCCACCCCTTACAGTTACAGAACCCGTTCCAGAACATGTTCCCCAACAGCCACAGCCACATGTTCCAGAACATGTTCCTGAAACTGAAGATCAAGTGGGGACGCACACAGACACAGAGGAATGTGATTATTTTACTGGGGACTGGGTGCCAAACCCGTTGGGTCCTGCTTATACCAATGAAAGCTGCAATCTCATTGAAACTCATCAGAATTGCATGAAGAATGGAAGGCCTGATAGAGAGTTTCTGTATTGGAGGTGGGCTCCTAGAGGCTGTGAGTTACCTCAGTTTGATGCATGGAGGTTTCTCGACATGATGCGTGATAAGGCCTGGGCACTGATCGGTGATTCTATAACTCGCAACCATGTGCAGTCATTGATGTGCCTGCTTTCGACGGTGGAACAACCTGAGATGTTCTACCATGACGAGGAATACAAGTCTAAAAGCTGGCACTTCCCCTCATACAACTTCAACATGTCGGTTATCTGGTCACCATTCCTTGTGCAAGCTGCCATTTTCGAGGACATAAATGGCATTTCAAGTTCTGAAGTGGAGCTACATCTTGACAAACTGGATAGTAAATGGATGGAGCAGTACTTTAACTTCGATTACCTCATTTTTTCAACTGGGAAATGGTTTCTCAAATCTGCAATCTACTATGAGAATGACACTATATTGGGGTGTCACTCCTGTCCTAAAAGGAACCTGACAGAGCTGGGGTTCAACTTTGCTTATCGCAAAACCCTCAAATCTGTCTTCAACTTCATAGCCTCTTCCAATCACAAAGGCTTGATATTTTTCCGGACATTCACGCCTGATCATTTCGAACACGGGGAGTGGTTTAGCGGCGGAACTTGCAATAGAACAGCGCCAATTAAAGAAGGTGAAATGGAAATGAAGGAGTTGAACATGATGCTTCGGAACATTGAGTTAGAGGAGTTTGGAAAGGCAGCTGCTGAAGCTTTAAGAAATGGAGTGAATCTTAAGCTTGCTGATTTTTCACCTCTTTCGCATTTGAGACCTGATGGGCATCCTGGTCCATACAGGGAGTTTCAACCATTTGCTAAGGGCAAAAATTCCAAAGTTCAGAATGATTGCTTGCATTGGTGTTTACCTGGGCCTATAGACTCATGGAATGACATACTAATGCAGATGGTTCTCAACGGGTGA 1389 0.4485 MRTDYMKNNFPLNHRNFLIKLALSIFFFGLAFRLLFFRSLSPQISTVLDTPFPERTTDSEPQQDPPVPPQVPENPPLTVTEPVPEHVPQQPQPHVPEHVPETEDQVGTHTDTEECDYFTGDWVPNPLGPAYTNESCNLIETHQNCMKNGRPDREFLYWRWAPRGCELPQFDAWRFLDMMRDKAWALIGDSITRNHVQSLMCLLSTVEQPEMFYHDEEYKSKSWHFPSYNFNMSVIWSPFLVQAAIFEDINGISSSEVELHLDKLDSKWMEQYFNFDYLIFSTGKWFLKSAIYYENDTILGCHSCPKRNLTELGFNFAYRKTLKSVFNFIASSNHKGLIFFRTFTPDHFEHGEWFSGGTCNRTAPIKEGEMEMKELNMMLRNIELEEFGKAAAEALRNGVNLKLADFSPLSHLRPDGHPGPYREFQPFAKGKNSKVQNDCLHWCLPGPIDSWNDILMQMVLNG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2800 462 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 167 458 IPR026057 GO:0016740
Dod04g2800 462 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 24 9 461 - -
Dod04g2800 462 MobiDBLite consensus disorder prediction 62 95 - -
Dod04g2800 462 Coils Coil 365 385 - -
Dod04g2800 462 MobiDBLite consensus disorder prediction 51 102 - -
Dod04g2800 462 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 461 IPR029962 GO:0016413
Dod04g2800 462 Pfam PMR5 N terminal Domain 113 166 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2800 Dod-Chr4 52053424 52058039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2800 - - gmx:100816814 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2800 04 52053424 52058039 Dod04g2800 04 52053424 52058039 ECH