Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2798 ATGATCAACCTCTCAAGGGAAACAATCAAGCTGTCTGGGACTCCGGTTGATCCTGAGAAAGATGAAGATCTCAAAAGGACCAAAAAAGATATTGAAAATAACATCACAAAAATCCTGAAGCTTATTAAGAACGAAGACCAACAAGGCAAAAGAAATAGGAATCAGAAACATGCCGGAAAAGAGGCAGAACTTGTGGGACTAATTGAGGACTTAAACAAACAATACCAGTCACTTTATGCACTGTGTGATCATCTTAACACAGAGTTTGAGAAAGTAGTTTCTCGCAGAAGAAGCAGGAGGGGTGCAGCCTCTGCCTCTGACTCGGACTCGGAGTACTTTTCCTCAGAGGAAACACATAATAATAACAGAATTCCAGCGCTGAAACATCACAATAAGGCTATTCCCAAAATAGATGAAGTTCTTCTTAAGATTGAGGCAAAGGAGCTTGAGGAGCAGTCAAGTTTGCAAACGAAGAAAGAGATTGAGAGCCTGAGTCAGCAGAAAAGGGTTCTAGAACTTCAAGTTGAAAGCCATGCACGTGAAGTTGAAGAGCTAAGTGCAAAGAAAAGGAATCTAGAACTTCAAATTGAAAGCCATGCACATGGAGTCGAAGAGCTAAGTGCAAAGAACACGGGGCTGAAAGACCGAGTTTCGGAGCTTGAATTGCTGTTGCAAAAGGAAAAAGGTGCAGTGTCTACTCTGCAGGCGAAACTCAAAAACAATGAGAGCAAGGCAAAGTCCAACATTGCAGAATTGATGGCACGGGTAAAAAACCTGGACCTGGTGACCGAATCTCTTAGTGCACAGAAAGGTGAGATGGAAGAGAAAATCAAAGGTGATAAAGCTGAAGCGTTAGCCCAAAAAAAGGACTTGATGGACAAGCTTAATGCCATGGAGAAAAACTTGGATTCTATATGCAATCAGAACAAAGAATTAGAAGCTCGGATGGAAAGAGACAAGGAACAAGTCTCCCAATACCTGTTTCAGATAAAGAACCTGAAGGATAATTTAGCTGAAGCGAATTCAGTTAAACAAAGCATGGTGGAAGAGAAAGAGCGGCTTCTCTCAAGATTAAAAGACCTGGAACTAGAATTGGAAGCTCAAAGCAACCAGAAAAATGAGCTGGAAGAGAAGGTAAGAGAGAAGAGTTATGACATGAAACAGCTGGAGGATGAGAACAAGGCTTTGCAGGATAGAAACAACGAACTGAAAAAAGCAATGACAGAGAGAGGGGAAGAGATAAATGCGCTTATGAGGGAACCTGAGAGCCAAAATAATGGTGCTTCTATGGAGGCCATGGCCTTAAAAGCAGAACTGAATGTTCTGAGACTAGAGTTGGACACTTTGCACGAACAGAAAAGCAAGTTGGAGATTCAGAAGGAGCGGAGCCAGAAGGAATATGAACAGAGCCTTGAAAAGATGGGAAACTTGAACAACAAGTTATCAAGCCAAATAGCTGATCATGAGAAAACCATAAAGGACCAAGCAGCAACCATTGACCGAATAAACGATGAGCACAAACAAACCAAGCTTTTGTCCAACAAGTTCAAGTTGAACCGGCAAACGGCAGAGAGGAAAATGGAGGAGCTGGCAGTAGAGTTCCGGAGGAAAATCGAAGACAACATCAGGTTGCTGCACCAGAGGATCCACGTGGCGGAACAACTGAACAATGAGAACAAAAACAGTTTCAAGATCGCAAATCGAAGGTACGAGGAACAGAACAAGATGCTGGGGGACAAGATTGCTAATTATGAAGAGGAGCTAAAGACGGCACGAGTGAGTGTTGCTGCACCCTCACCATTTTTTTATGGCGGTTCAAACGGTTTCGTTTTGAATGCTCTGGATGAGTTAGAATCAGCTGCTGCGAACGGTTTAGATTTGGCGGTTGGGAAGTTTGAGGAACACAAAAAGCGTGTCCTTAGCCGGGTCTATAAGATGACGGGCGAGGTTCAGTTTGCGAAGGATTGGATAAAGAAAAGGAATGTTGAGATGAAAGAGCTGCAAGACAACGTGGAGTGCCTCAAGGCGTTGCTGAATAGCAAAGAGGAGCAGGAATTCTCGTTGAGAGAGAAGGTGTGGCAACTGGAAGCGAAAGTGAGCAAGGAAGGAGGGGAGAATATGAACCTAAGTAACGCAGTGAGCCAGCTAGAGAAGAAAGTGGGGAAATTGGAGAAGAGGCTGAAAGAGAAGGATGAGGACTTGGTTAGCCTTGGCGAGAAGAAGAGGGAAGCAATAAGGCAACTGTGTTTCGCGGTTGATTTTCACCACGACCGTTGCACGTATCTTAAGGATTTGGTCACCAAGATGGGGACCAACAACAGGAGATGA 2328 0.4381 MINLSRETIKLSGTPVDPEKDEDLKRTKKDIENNITKILKLIKNEDQQGKRNRNQKHAGKEAELVGLIEDLNKQYQSLYALCDHLNTEFEKVVSRRRSRRGAASASDSDSEYFSSEETHNNNRIPALKHHNKAIPKIDEVLLKIEAKELEEQSSLQTKKEIESLSQQKRVLELQVESHAREVEELSAKKRNLELQIESHAHGVEELSAKNTGLKDRVSELELLLQKEKGAVSTLQAKLKNNESKAKSNIAELMARVKNLDLVTESLSAQKGEMEEKIKGDKAEALAQKKDLMDKLNAMEKNLDSICNQNKELEARMERDKEQVSQYLFQIKNLKDNLAEANSVKQSMVEEKERLLSRLKDLELELEAQSNQKNELEEKVREKSYDMKQLEDENKALQDRNNELKKAMTERGEEINALMREPESQNNGASMEAMALKAELNVLRLELDTLHEQKSKLEIQKERSQKEYEQSLEKMGNLNNKLSSQIADHEKTIKDQAATIDRINDEHKQTKLLSNKFKLNRQTAERKMEELAVEFRRKIEDNIRLLHQRIHVAEQLNNENKNSFKIANRRYEEQNKMLGDKIANYEEELKTARVSVAAPSPFFYGGSNGFVLNALDELESAAANGLDLAVGKFEEHKKRVLSRVYKMTGEVQFAKDWIKKRNVEMKELQDNVECLKALLNSKEEQEFSLREKVWQLEAKVSKEGGENMNLSNAVSQLEKKVGKLEKRLKEKDEDLVSLGEKKREAIRQLCFAVDFHHDRCTYLKDLVTKMGTNNRR* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2798 775 Coils Coil 567 594 - -
Dod04g2798 775 Coils Coil 68 88 - -
Dod04g2798 775 Coils Coil 203 255 - -
Dod04g2798 775 Coils Coil 28 48 - -
Dod04g2798 775 Coils Coil 432 505 - -
Dod04g2798 775 PANTHER COP1-INTERACTIVE PROTEIN 1 27 188 - -
Dod04g2798 775 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 27 188 - -
Dod04g2798 775 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 180 772 - -
Dod04g2798 775 Coils Coil 706 747 - -
Dod04g2798 775 Coils Coil 513 540 - -
Dod04g2798 775 MobiDBLite consensus disorder prediction 94 127 - -
Dod04g2798 775 PANTHER COP1-INTERACTIVE PROTEIN 1 180 772 - -
Dod04g2798 775 Coils Coil 154 195 - -
Dod04g2798 775 Pfam KIP1-like protein 17 83 IPR011684 GO:0003779
Dod04g2798 775 Coils Coil 657 684 - -
Dod04g2798 775 Coils Coil 281 420 - -
Dod04g2798 775 MobiDBLite consensus disorder prediction 13 29 - -
Dod04g2798 775 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 4 89 IPR011684 GO:0003779
Dod04g2798 775 MobiDBLite consensus disorder prediction 105 121 - -
Dod04g2798 775 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2798 Dod-Chr4 52037859 52040500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2798 - - adu:107479793 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2798 04 52037859 52040500 Dod04g2798 04 52037859 52040500 ECH