Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2776 ATGAACGGTAATCCGAAACACGAGCGCCGGTGGGCGTCCGACTCCGTTCCCGGAAATGCAACCGTCAGCTCCGGGACTTCGCCGGGAACAGAGTCCACTTCCGCCGGTGCCGAGGAGTTTGTCGAGGTCACTCTCGATCTTCAAGACGATGACACCATCGTTCTTCGGAGCGTTGAGCCAGCCACTGTTATTAACGTCGACGAGAGCGTCGCCGGCAGTGGATACGACACTCCGGTGTCCATCTCGCACTCGCCGACGATCCGGCGGAGCTCGTCGAGAGGATTCCGGCAGTTCTCGCAGGACCTGAAGGCCGAGGCGGTTGCCAAGGCCAGGCAGTTCTCTCAGGAGCTTAAGGCGGAGCTGCGGCGGTTCTCATGGAGCCACGGCCATGCTTCGCGAGATCTTTCGTCTTCCTCGGCTCAGAATGTGACCGGAGGAGCTGCCGGAGGCGAATTTGAGACGGCGCTGGCGGCTCGCGCTCTAAGGAAGCAACGAGCTCAGCTTGATCGCACTCGTTCCGGAGCTCAGAAAGCACTGCGTGGTCTGCGATTCATCAGCAGTAAATCCAATAATGGCGTTGATGCGTGGATCGAGGTGCAAAGCAACTTCGATAGGTTCGCCAAGGACGGTTACCTCCATCGCGCCGATTTTGCTCAGTGCATAGGGATGAAAGATTCCAAGGAATTCGCTCTGGAACTATTTGATGCTCTGAGTCGTAAACGAAGGCTAGCGGTTGATAAAATTGGCAAGGATGAGCTTTACGAGTTCTGGAAGCAGATTACCGATCAAAGCTTTGATTCGCGGCTCCAGATCTTCTTCGACATGGTGGACAAGAACGAAGATGGGAGAATCACCGAAGCAGAAGTGAAAGAGATCATCATGTTGAGCGCTTCCGCGAATAAATTATCCAGATTGAAAGAGCAAGCAGAAGAATATGCAGCTCTGATCATGGAAGAGTTAGACCCGGAAGGACTTGGCTACATCGAGCTATGGCAATTGGAGACACTTCTTTTACAAAAGGACACGTACCTCAACTACAGCCAAGCTCTAAGCTACACAAGCCAAGCTCTGAGCCAGAACCTACAGGGACTAAGGACAAGAAGTCCTATTCGTAGGATGAGCCGCAGATTGCTCTACTATTTGCAGGAGAATTGGAAGAGACTTTGGGTTTTAACATTGTGGGTTTGTATAATGATCGGGCTGTTCACTTGGAAGTTCATTCAGTACAAGCAGAAAGATGCCTTTCAGATCATGGGCTACTGTCTTCTCACGGCCAAAGGTGCGGCTGAGACTTTAAAGTTCAACATGGCACTTATATTATTGCCCGTCTGTAGGAATACCATAACTTGGCTCAGGTCTACTAAGCTGGCTTACATTGTGCCTTTTGATGACAACATCAACTTTCATAAGACAATTGCTGCGGCCATTGTGATTGGTATTATACTTCATGCCGGGGATCACCTTGCTTGCGACTTTCCAAGACTTGTAAACGCGTCTGAGGGTGATTATGCTAAGTATTTGAAAGGTGTATTTGGTGATCATAAACCCAGTTATCTCGACATAGTTAAAGGGATTGAGGGTGTGACTGGAATATTGATGGTGATTTTTATGTCAATTGCATTTACGCTTGCGACCAAATGGTTCAGGAGAAATCTCATTAAGCTGCCTAAACCATTTAGTAGGCTCACCGGCTTCAATGCCTTCTGGTATTCACACCATCTGTTTGTCATTGTCTATGTCCTGCTCATCATCCACGGTATAAAGCTTTACCTCGTGCACAAATGGTACCTTAAAACGACATGGATGTATCTTTCAGTTCCAATTTTACTATATGCGGCAGAAAGAACACTCAGATTCTTTCGTTCTGGTTTCTATACTGTGCATCTGATAAAGGTTGCTATATATCCTGGAAATGTTCTCACATTGCAAATGTCCAAGCCTCCTCAATTTCGTTACAAGAGCGGACAATACATGTTTGTACAATGTCCCGCAGTTTCTCCTTTTGAGTGGCATCCGTTTTCTATTACCTCAGCCCCTGGCGATGACTACCTGAGTGTTCACATTCGGCAACTGGGTGACTGGACACAGGAGCTTAAAAGGGTATTCTCTGAGGCCTGTGAGCCTCCTGTATCTGGGAAGAGCGGCCTTCTCAGGGCTGATGAAACGACAAAGAAGAGTTTGCCAAAGCTAAAGATAGACGGACCTTATGGTGCGCCAGCACAAGATTATAGAAAATACGATGTTTTGTTACTTGTCGGTCTCGGAATAGGAGCAACACCTTTCATCAGCATTCTGAAAGATCTTCTAAACAACATCATCAAAATGGAGGAGCAGGCGGATTCAATCTCTGATATAAGTAGAGGTTCAGACCTTAGTGTTGGGAGTACAGATTCACCTTCTCTCAACAAAATTGCTCCAAAAAGGAAGAAGACACTGAAAACTACCAACGCTTATTTCTACTGGGTTACAAGAGAGCAAGGGTCTTTTGATTGGTTTAAAGGAGTCATGAATGAAGTAGCTGAACTTGATCAAAGGGGTGTCATTGAGATGCACAATTACTTGACTAGCGTATACGAGGAAGGTGATGCTAGATCCGCCCTCATCACCATGGTGCAAGCACTCAACCATGCCAAAAATGGTGTTGATATCGTTTCTGGGACTAGGGTGCGAACTCATTTTGCTAGACCGAACTGGAAGAAGGTTTTCTCTAAAATGTGTTCCAAACACTATAGTGGACGGATAGGGGTATTTTATTGCGGTGCACCTGTTTTGGCCAAAGAACTTAGCAAGCTCTGCTTCGAGTTCAATGAAAAAGGTCCAACAAAATTCGAGTTTCACAAGGAGCATTTTTAA 2853 0.4697 MNGNPKHERRWASDSVPGNATVSSGTSPGTESTSAGAEEFVEVTLDLQDDDTIVLRSVEPATVINVDESVAGSGYDTPVSISHSPTIRRSSSRGFRQFSQDLKAEAVAKARQFSQELKAELRRFSWSHGHASRDLSSSSAQNVTGGAAGGEFETALAARALRKQRAQLDRTRSGAQKALRGLRFISSKSNNGVDAWIEVQSNFDRFAKDGYLHRADFAQCIGMKDSKEFALELFDALSRKRRLAVDKIGKDELYEFWKQITDQSFDSRLQIFFDMVDKNEDGRITEAEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRTRSPIRRMSRRLLYYLQENWKRLWVLTLWVCIMIGLFTWKFIQYKQKDAFQIMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRSTKLAYIVPFDDNINFHKTIAAAIVIGIILHAGDHLACDFPRLVNASEGDYAKYLKGVFGDHKPSYLDIVKGIEGVTGILMVIFMSIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGIKLYLVHKWYLKTTWMYLSVPILLYAAERTLRFFRSGFYTVHLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEQADSISDISRGSDLSVGSTDSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHYSGRIGVFYCGAPVLAKELSKLCFEFNEKGPTKFEFHKEHF* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2776 950 Pfam Respiratory burst NADPH oxidase 167 267 IPR013623 GO:0004601|GO:0050664
Dod04g2776 950 Gene3D - 168 285 - -
Dod04g2776 950 Coils Coil 765 785 - -
Dod04g2776 950 Coils Coil 295 315 - -
Dod04g2776 950 ProSiteProfiles EF-hand calcium-binding domain profile. 264 299 IPR002048 GO:0005509
Dod04g2776 950 CDD EFh 228 294 IPR002048 GO:0005509
Dod04g2776 950 SUPERFAMILY EF-hand 192 346 IPR011992 -
Dod04g2776 950 CDD NOX_Duox_like_FAD_NADP 629 892 - -
Dod04g2776 950 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 744 950 IPR039261 -
Dod04g2776 950 Gene3D - 737 950 IPR039261 -
Dod04g2776 950 PRINTS Cytochrome B-245 heavy chain signature 751 768 IPR000778 GO:0016020|GO:0016491
Dod04g2776 950 PRINTS Cytochrome B-245 heavy chain signature 728 741 IPR000778 GO:0016020|GO:0016491
Dod04g2776 950 PRINTS Cytochrome B-245 heavy chain signature 528 551 IPR000778 GO:0016020|GO:0016491
Dod04g2776 950 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 622 742 IPR017927 GO:0016491
Dod04g2776 950 MobiDBLite consensus disorder prediction 16 34 - -
Dod04g2776 950 ProSitePatterns EF-hand calcium-binding domain. 277 289 IPR018247 -
Dod04g2776 950 Pfam FAD-binding domain 626 739 IPR013112 GO:0016491
Dod04g2776 950 Pfam Ferric reductase NAD binding domain 746 932 IPR013121 GO:0016491
Dod04g2776 950 Gene3D Translation factors 613 705 - -
Dod04g2776 950 SFLD NADPH oxidase subgroup (NOX) 109 950 - -
Dod04g2776 950 MobiDBLite consensus disorder prediction 1 39 - -
Dod04g2776 950 SUPERFAMILY Riboflavin synthase domain-like 625 738 IPR017938 -
Dod04g2776 950 PANTHER RESPIRATORY BURST OXIDASE2 29 950 - -
Dod04g2776 950 Pfam Ferric reductase like transmembrane component 427 583 IPR013130 -
Dod04g2776 950 PANTHER NADPH OXIDASE 29 950 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2776 Dod-Chr4 51802817 51811463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2776 9 950 Miscellaneous Gene Families AT1G64060 79.175 0.0 1556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2776 K13447 - gmx:100801077 1704.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2776 04 51802817 51811463 Dod04g2776 04 51802817 51811463 ECH
Dod02g1132 02 14090699 14100953 Dod04g2776 04 51802817 51811463 PCT