Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2772 ATGAAGTGCCGATCCGTGGCGTGCATATGGTCAGGCACGCCCTTCCCTCACCGAGTCACCGCCGTCGCCGCCTTCTCCCAACCTCCTTCCTTCTTCACCGCCGGATCCGATGGCTCCATCATCTGGTGGTCCCTTTCCCCGCAAGTTAAGGCGGTGGGCATATTGTGCGGTCACGCAGCTCCCATCACTGATCTCAACACTTGTAGTCCCGTTTCCGCAGAACAAGAAGAAGAAGAAGAAACCGCTGATGATGGTGGCTCAAGTAATTTAGTGGTGAATTCTAGTTCAAGTAGTCGTAGTGCCTTGATTAGCGCGTGTTCTGATGGGTTCTTGTGTGTGTGGAGTAGAAGCAGTGCCCATTGCCGGTGCAGGAGGAAATTGCCGCCTTGGGTTGGCACCCCTCGCATGATTCGAGCTTTGCCTTCGAGGCCGAGATATGTGTGCATTGCTTGTTCTTTCATGGAACATTCTGGAAGTTCAGGGGAGGGGATTGAAGGGTTGGTGGATAGAGAAACAGCTCACCACAGGAAGCCCCCCAAGTGTACCATTGCTGTTGTAGACACCTATTCGCTTTCGATTACTCAAACTGTTTTTCATGGAAATTTATCCATTGGCCCAATCAGGTTTATGGAAGTAGTTTTAGCTGATAATGTTGAGAAGGGGCATTCTGTGCTTGTGGCTGATTCTGCGGGTGGGCAACAGATGGTTTCGATATCCAAGGACCCTCTCGATCGTGGGGAAAGCTTGACGAGTTCACCCAAAGATACTTCTCAGTTGGAGAGTTCTTACTGCTTTGAGGGATTGAGTGGTGTGGATCAAGTTGTTTCAGTTTTAAATTATGGGAACATTGTTGCATTTATTTTAAAAGATAGCTGCATATTTAGGTTGTTGTCTAGTGATACTACAATTGGAGAGGTTTCTTTTGACGGCAATTTATTATGTTTGAATGGGGATTCTACTCAAGCACATGTTGTGGGTGGCATTTTTCTTGAAGGTGATGATTTGGGTAATATGGCCAATGCCCATGAATGCAACAAGTTGATTCCAGTATATTTTGTTGTGTGGAATGATATAGGTGCTGCAATTATCTATGAAATATCGTATCAGAATGATGTTTTTCGATGTGAGCCTCATTCTGAGATTCCCCCTACTCATTGTCAGCCTGATATGAGATTATCTGTTTTTTTTCTACAAGTAAATCATTATCTTGTCTGCATAAAATCAATTTGCTTTCATTATGAGGAACCTTTGCTATGGAGACCGCATGTCACAATCTGGTCACTGCATAATTTGGATGATAAACCTGGTAAATTGCATCGTCAATGCAGAATGATCAGTGATGGTGTATCTGTTGCTGACTGGTTTGGGAAGTCTACTCAGCTTGAAAGACTGGCTGGTCTAGAGACAAATTCAACTTCTGGTGCAAGTACAAGTTCGGAAAATATAAACAACATACATACGGATGGCATAAATAATTATTATGCTAACAAGGGACGGATAGTTTCTTCTTCCATGATTATCTCTGAGAACCTCTTTACTCCTTATGCTGTTGTGTACGGTTTTTTAAGTGGAGAAATAGAGCTACTAAAATTTGATCTGTTTCAAGGGATTTACGTAGATGATGCAAGTTCCAATCTTGATCAAACGTCAACTGCTTGCAGACAGTACTTTTCAGGACACACAGGTGCTGTACTTTGTTTGGCAGTGCATCAAATGATGAGTAATGCCAAAGGCCAGAATTTCAAACGGGTTTTGGTGTCTGGAAGTATGGATTGCACAATTCGTGTATGGGATCTTGACACTGACTGCGTTGTTATGGTAATGCATCATCATGTGGCTCCAGTGCGTCAAATTATTCTGCCCCCATCTTTGACTGGAAATCCTTGGAGTGATTGCTTCCTTTCTGTTGGAGAGGATGCATGTGTTGCTCTTGTTTCTCTTGAGACTCTGTTGGTCGAGAGAATGTTTCCTGGACACATGAACTATCCTTCAAAAGTGGTATGGGATGGAGCTAGAGGTTATATTGCCTGTCTCTGTCAAACACATTATGGAACTTCTGATGCCACTGATGTGTTATACATTTGGGATGTAAAAACAGGTTCCCGCGAGCGAGTCCTGCGTGGGACAGCTGCACATTCAATGTTTGATCATTTTTGTAAAAGCATTAGCATGAATTCCATATCTGGCACATTGCTGAATGGAAATACATCAGTTTCTTCGTTACTTCTTCCAATAGTTGATGATGCAAGGCTCTCTAACTCCCCATTAAGCCCATCAGAGAACTCACTTACTTCATCAAAGTCATCACCAAATATTTCAAACATGACTGAGATGAATTCTTCCGAAAGAAATACAGGTAAAGGAAATTTAGCAAAGCCAACTTTTTCCTCCCCATTTAGTCTCTGGAGTAAAAAGCTTCCTGTGAAATGCCTATGCCCATTTCCTGGCGTTGTGTCTCTGAGTTTTGATCTTGCATCATTGATGTTCTCTTATAAAAGGAATGAGTCCCTGGAAAATGGTGGTGCCAAGTCAGCGAATATCAATTTGAAGCAGCAGGGACCTCAGGAGCAAAATCCTGGCGGCCATAATACTGAATTATTAGAGGGGCACGACTTGTTTAACCTATTTGAAGGATACTTGCTTCGGTATAGCTTGTCCTTTTTACATTTGTGGAGTGTGGACAGTGAGCTTGATAACTTGCTGATAAGTGACATGAAGCTGACGAAACCAGAGAATGTTATGGTAGCTTCAGGTCTACAGGGGGATAAAGGATCATTGACATTGACATTTCCTGGCCTGAGTGCTACTCTTGAGCTCTGGAAATCATCTTCTGAGTTTTGTGCAATGAGATCATTGACAATGGTATCCCTTGCCCAACGTTTGATTAGCTTGTCTCACTCTGGTTCAGCAGCAAGCAGTGCTTTGGCAGCATTCTATACCCGGAATTTCATGGAAAATTTTCCAGATATGAAGCCGCCTTCATTACAGTTGTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCTGCACGCTCTATATTTCATTGTGCTGCTTGTCATGCTATCCCACTTCCTCTATGCGATTCAAAACCTACTGAGCCAACTAATATGAACTCCCCAACTGGAAGGACAGGCAAACAGCTGGGAGATATGAAACCGGAAAGTACATCTCCTAAGACAGAAAAACGGAGAATTTCCCAAGAGGAGGAGTCCAAGATACTTGCCTGGCTAGAATCATTTGAAATGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGCTATGACATCTCGCATTATTGTTGCTGCTGCATTGGCTATCTGGTACCCTAGTCTTGTAAAGCCAAGTGTTGCCACATTAGTTGTTCATCCATTAATGAAGTTGGCTATGGCCATGAATGAGAAGTATAGCTCCACTGCAGCTGAGCTCCTTGCAGAGGGCATGGAAAGTACATGGAAAGAATACATTGTCTCTGAGATACCTCGTCTTATTGGGGATATTTTTTTCCGAGTAGAGTTGAGTGGCCCATCTAACAAATCAGTGACAGAAATTACAGGTGCATCATTTTCTATTCGAAAGACTTTGGTCGAGGTTCTTCTTCCAAGCTTAGCCATGGCTGATATTCCAGGTTTTTTGACTCTAATAGAGAGCCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACATGGTGTCTCTCTTGACTCTTATAAGGATTATGCGTGGTTCTCCAAGGAATTTATCTCAGTATCTTGACAAGGTCGTGAACTTCATTTTACAAACTGTAGATCCTAGCAACTCAGTTATGAGGAAAACATGCTTCCAGAGTTCAATGACTACTTTAAAGGAGGTTGTACGTGTATATCCTATGGTTGCTGTCAATGATTCATGGACCAGACTGGCAGTTGGGGATGTGATTGGAGAAATTAACAATGCAAGCATCAGGGTTTATGATATGCAAAGTGTCACAATGATAAAGGTTTTAGATGCAAGTGGACCTCCAGGACTTCCAAGTTTGCTCACAGCAGCATCAGGATCAATGTTAACTACTGCAATTTCAGCTCTGAGCTTTTCTCCTGATGGAGAGGGACTGGTTGCTTTTTCTGAACATGGGCTAATGATTAGATGGTGGTCTCTGGGATCTGTCTGGTGGGAGAAATTGAGCCGGAACTTTGTTCCCGTCCAGTGTACAAAACTTATCTTTGTTCCTCCGTGGGAGGGATTCTCGCCTAATTCATCCAGGTCAAGCATAATGGCCAACATTTTGGAAAATGACAGGGAGTCGAATTTGCAGGACAATGTGAGGGATTCAAGTCATGGGGACAGTATCAAACAGTTGCTTCATAATCTGGACCTTTTTTATCGACTGGAATGGGTTGGTGAACGGAAAGTACTTCTTACGAGACATGGCCGTGAATTGGGTACTTTTCAGTTTTCAGCATCAGCTATTTCTGATCTCTGA 4476 0.4301 MKCRSVACIWSGTPFPHRVTAVAAFSQPPSFFTAGSDGSIIWWSLSPQVKAVGILCGHAAPITDLNTCSPVSAEQEEEEETADDGGSSNLVVNSSSSSRSALISACSDGFLCVWSRSSAHCRCRRKLPPWVGTPRMIRALPSRPRYVCIACSFMEHSGSSGEGIEGLVDRETAHHRKPPKCTIAVVDTYSLSITQTVFHGNLSIGPIRFMEVVLADNVEKGHSVLVADSAGGQQMVSISKDPLDRGESLTSSPKDTSQLESSYCFEGLSGVDQVVSVLNYGNIVAFILKDSCIFRLLSSDTTIGEVSFDGNLLCLNGDSTQAHVVGGIFLEGDDLGNMANAHECNKLIPVYFVVWNDIGAAIIYEISYQNDVFRCEPHSEIPPTHCQPDMRLSVFFLQVNHYLVCIKSICFHYEEPLLWRPHVTIWSLHNLDDKPGKLHRQCRMISDGVSVADWFGKSTQLERLAGLETNSTSGASTSSENINNIHTDGINNYYANKGRIVSSSMIISENLFTPYAVVYGFLSGEIELLKFDLFQGIYVDDASSNLDQTSTACRQYFSGHTGAVLCLAVHQMMSNAKGQNFKRVLVSGSMDCTIRVWDLDTDCVVMVMHHHVAPVRQIILPPSLTGNPWSDCFLSVGEDACVALVSLETLLVERMFPGHMNYPSKVVWDGARGYIACLCQTHYGTSDATDVLYIWDVKTGSRERVLRGTAAHSMFDHFCKSISMNSISGTLLNGNTSVSSLLLPIVDDARLSNSPLSPSENSLTSSKSSPNISNMTEMNSSERNTGKGNLAKPTFSSPFSLWSKKLPVKCLCPFPGVVSLSFDLASLMFSYKRNESLENGGAKSANINLKQQGPQEQNPGGHNTELLEGHDLFNLFEGYLLRYSLSFLHLWSVDSELDNLLISDMKLTKPENVMVASGLQGDKGSLTLTFPGLSATLELWKSSSEFCAMRSLTMVSLAQRLISLSHSGSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARSIFHCAACHAIPLPLCDSKPTEPTNMNSPTGRTGKQLGDMKPESTSPKTEKRRISQEEESKILAWLESFEMQDWISCVGGTSQDAMTSRIIVAAALAIWYPSLVKPSVATLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKEYIVSEIPRLIGDIFFRVELSGPSNKSVTEITGASFSIRKTLVEVLLPSLAMADIPGFLTLIESQIWSTASDSPVHMVSLLTLIRIMRGSPRNLSQYLDKVVNFILQTVDPSNSVMRKTCFQSSMTTLKEVVRVYPMVAVNDSWTRLAVGDVIGEINNASIRVYDMQSVTMIKVLDASGPPGLPSLLTAASGSMLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILENDRESNLQDNVRDSSHGDSIKQLLHNLDLFYRLEWVGERKVLLTRHGRELGTFQFSASAISDL* 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2772 1491 SUPERFAMILY WD40 repeat-like 1296 1386 IPR036322 GO:0005515
Dod04g2772 1491 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1482 - -
Dod04g2772 1491 Pfam WD domain, G-beta repeat 553 598 IPR001680 GO:0005515
Dod04g2772 1491 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1482 - -
Dod04g2772 1491 MobiDBLite consensus disorder prediction 71 92 - -
Dod04g2772 1491 MobiDBLite consensus disorder prediction 754 789 - -
Dod04g2772 1491 Gene3D - 514 825 IPR015943 GO:0005515
Dod04g2772 1491 SUPERFAMILY ARM repeat 967 1317 IPR016024 -
Dod04g2772 1491 SMART WD40_4 1349 1383 IPR001680 GO:0005515
Dod04g2772 1491 SMART WD40_4 550 598 IPR001680 GO:0005515
Dod04g2772 1491 SMART WD40_4 649 696 IPR001680 GO:0005515
Dod04g2772 1491 SMART WD40_4 48 115 IPR001680 GO:0005515
Dod04g2772 1491 SMART WD40_4 601 646 IPR001680 GO:0005515
Dod04g2772 1491 SMART WD40_4 5 44 IPR001680 GO:0005515
Dod04g2772 1491 SUPERFAMILY WD40 repeat-like 16 708 IPR036322 GO:0005515
Dod04g2772 1491 ProSitePatterns Trp-Asp (WD) repeats signature. 585 599 IPR019775 -
Dod04g2772 1491 Gene3D - 4 242 IPR015943 GO:0005515
Dod04g2772 1491 MobiDBLite consensus disorder prediction 1034 1057 - -
Dod04g2772 1491 MobiDBLite consensus disorder prediction 1033 1070 - -
Dod04g2772 1491 ProSiteProfiles Trp-Asp (WD) repeats profile. 557 607 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2772 K24738 - gmx:100818675 2274.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2772 04 51700397 51709708 Dod04g2772 04 51700397 51709708 ECH