Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2762 ATGGATGTATTATCATTACTACTAGCTCTTACGGTTGCTTTGCCAAGCCTGAATGTAGTAGAGAGCCGCAGAAGTCCTCTTCAGGATTGCTTCCAGTACAGTGCTATGAGTTGCAGAACTTACAGTGCCTCACTGACAGATTTCGGAGGTGTTGGAGATGGAACAACTCTCAACACCAAAGCCTTTCAGTCAGCCATAGATCATATGAGCAAGTTCTCATCAACTGGCGGGTCTCAACTTTATGTTCCTGCAGGAAAATGGTTAACTGGCAGCTTCAATCTCACTAGCCATTTCACTCTATTCCTAGACAAGGATGCTGTAATCCTTGGCTCTCAGGATGAGAATGACTGGCCAGTGATTGTTCCCTTGCCATCTTATGGTCGAGGAAGGGACGCCCAAGGTGGAAGGTTTAGCAGTCTAATTTTTGGAACTAACCTCACTGATGTGATCATAACTGGGAACAATGGCACAATAGATGGACAAGGTGATCTGTGGTGGCAAAAATTCCACCAGGGGCAGCTAATTTATACACGGCCTTACCTGATTGAAATCATGTATTCAGAGGATGTTCAGATATCTCATCTCACTTTGGTCAATTCTCCATCATGGAATGTCCATCCTGTTTACAGCAGCAACGTTGTTGTTCAAGGCATCACAATTCTTGCTCCTGTGAATTCGCCAAATACTGATGGGATCAACCCTGACTCGTGCACAAACACGCGAATCGAGGACTGCTATATTGTGTCCGGGGATGACTGTGTGGCTGTGAAGAGTGGGTGGGATGAGTATGGTATAGCTTATGGAATGCCAACCAAGCAGCTGGTAATAAGACGCCTCACATGTATTTCTCCAACAAGTGCTGTGATTGCTTTAGGGAGTGAGATGTCTGGTGGGATTCAGGATGTGAGGGCTGAGGACATTGTAGCCATCAATTCAGAATCAGGAGTTAGGATCAAAACTGCTGTTGGAAGAGGAGGCTATGTCAAGGACATATATGTTAGAAGGATGACCATGGCAACCATGAAGTGGGCATTTTGGATGACAGGAAATTATGGCTCTCATGCTGACAACAACTATGATCCCAATGCATTGCCTGTGATTCAGAATATCAATTACCGCGACATGGTCGCTGAAAATGTGACTCAGGCAGCAAGGTTGGAGGGTATATCTAGCGCTCCATTCACAGGAATCTGTATATCCAATGTAACCATTGAACTAGCAAAGAGTGCTAAAAAAGTTCAATGGGCTTGCACTGATGTTGCTGGGATTTCAAGTGGTGTGACTCCGGAGCCATGTAATCTGTTGCCAGAACAAGGACCAGAGAAGACTAGGGAATGTACCTTCCCAGAAGATGGTTTGCCCATTGATGATGTCAAGGTTCAAACTTGCACTTACAGAAGGAATTTACGACATTGTAAAAGAAATGACTAA 1431 0.4472 MDVLSLLLALTVALPSLNVVESRRSPLQDCFQYSAMSCRTYSASLTDFGGVGDGTTLNTKAFQSAIDHMSKFSSTGGSQLYVPAGKWLTGSFNLTSHFTLFLDKDAVILGSQDENDWPVIVPLPSYGRGRDAQGGRFSSLIFGTNLTDVIITGNNGTIDGQGDLWWQKFHQGQLIYTRPYLIEIMYSEDVQISHLTLVNSPSWNVHPVYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIYVRRMTMATMKWAFWMTGNYGSHADNNYDPNALPVIQNINYRDMVAENVTQAARLEGISSAPFTGICISNVTIELAKSAKKVQWACTDVAGISSGVTPEPCNLLPEQGPEKTRECTFPEDGLPIDDVKVQTCTYRRNLRHCKRND* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2762 476 Pfam Glycosyl hydrolases family 28 78 420 IPR000743 GO:0004650|GO:0005975
Dod04g2762 476 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 6 467 - -
Dod04g2762 476 SUPERFAMILY Pectin lyase-like 34 464 IPR011050 -
Dod04g2762 476 Gene3D - 27 425 IPR012334 -
Dod04g2762 476 PANTHER PECTIN LYASE-RELATED 6 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2762 Dod-Chr4 51574606 51578187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2762 2 466 Glycoside Hydrolase AT3G61490 67.585 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2762 - - gmx:100785841 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2762 04 51574606 51578187 Dod04g2762 04 51574606 51578187 ECH