Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2748 ATGAGAAGAGCTAATGGGGATGATGGCAGAGCTGTCAACAACACTTTGGATACTATAAACGCTGCTGCATCTGCCATCGCCTCTGCCCAGAATCGCGTTTCCCAACCTACTCTCCTGAAGAAGAAATGGGGGAGCTGGTTGAACATATCCGGGTGTTTTGGATACCAAAAGAACCGAAAGCGCATTGGTCATGCTGTCCTTGTTCCTGAAGCAGCACCTCCTGGAGCAGATCCTGCTGCAGCTGTTAGTTCAACACAAGCACCTACAATAACACTTCCCTTTGTTGCACCTCCTTCATCTCCTGCATCTTTCTTTCAATCAGAACCACCTTCAACTGCACAATCACCAGTCGGTATAGTATCCCTCACTTCTGTGTCTGCAAGCATGTACTCTCCTGGTGGCCCTGCCTCAATCTTTGCCATTGGCCCTTACGCCCACGAGACCCAATTGGTTTCGCCGCCTGTATTCTCGGCATCATCAACCGCTCCTTTCACTCCACCCCCCGAGTCTGTCCACTTGACCACGCCTTCCTCGCCGGAGGTGCCATTTGCTCAGCTACTTGATCCCAACTATAGGAATGGAGAGACCTATCAGAGGATCCAAATATCTCACTATGACTTCCAATCCTATCAGTTTCAACCGGGAAGCCCAGTAGGTCAACTCATATCACCAAGATCTGCCATCTCAGCTTCTGGAACCTCTTCTCCTTTCCCTGATGGTGAGTTTCCTGCTGGTGGCTCCCATATCCTTGACTTCCAAAAAGCAGACCCTTGCAAGCTTCTTAACTTGGATAAACTGTCAACTTATGAGAACCAAAAGTCAAACCAAGGATCTGGGTCTATAACCCCAGATGCTGTAAAGTCCACAACTCAATGGGTTTCTGAGATCAGAATGTCCCCACGCCCAAGCAATAATTGCAAGAATGAGATTAGTGTAAGCCATAGGGTCTCATTTGAATTATCTTCCCACAAAGGATTGAGACGTGTGGAAAACAAGCCAGCAGCATCAGCATGGCCTAAAGTCCTGGCAAAATTGAAAAATGAGGCAGCAACACGAGGCAAAGCAGAAAATTCTAGAGAAACTAGGCATGATGACAAACAACACGCTGCTGAAACTTCCAAGGATGTACCCCAGCAGACCAATTTGGGTGGAGACGAGGCAACAGTTCATGAGAAGGAGCAGTCCTTAACACTTTCTTCTGCTAAGGAATTCAATTTTGATAATGCAGATGGGGCAGATTCTCATGGTCCCAACATAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCAGGCAAGGAAGGAGGGGCCTCCAAGAATTGGTCATTTTTCCCAATTATTCAGCCTAGTATCAGCTAA 1356 0.4749 MRRANGDDGRAVNNTLDTINAAASAIASAQNRVSQPTLLKKKWGSWLNISGCFGYQKNRKRIGHAVLVPEAAPPGADPAAAVSSTQAPTITLPFVAPPSSPASFFQSEPPSTAQSPVGIVSLTSVSASMYSPGGPASIFAIGPYAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPNYRNGETYQRIQISHYDFQSYQFQPGSPVGQLISPRSAISASGTSSPFPDGEFPAGGSHILDFQKADPCKLLNLDKLSTYENQKSNQGSGSITPDAVKSTTQWVSEIRMSPRPSNNCKNEISVSHRVSFELSSHKGLRRVENKPAASAWPKVLAKLKNEAATRGKAENSRETRHDDKQHAAETSKDVPQQTNLGGDEATVHEKEQSLTLSSAKEFNFDNADGADSHGPNIVADWWANEKVAGKEGGASKNWSFFPIIQPSIS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2748 451 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 451 IPR040420 -
Dod04g2748 451 MobiDBLite consensus disorder prediction 221 236 - -
Dod04g2748 451 MobiDBLite consensus disorder prediction 221 242 - -
Dod04g2748 451 MobiDBLite consensus disorder prediction 348 383 - -
Dod04g2748 451 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 451 - -
Dod04g2748 451 MobiDBLite consensus disorder prediction 348 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2748 Dod-Chr4 51385718 51388814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2748 - - adu:107479926 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2748 04 51385718 51388814 Dod04g2748 04 51385718 51388814 ECH
Dod02g1102 02 13676588 13680145 Dod04g2748 04 51385718 51388814 PCT