Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2747 ATGCCCCCATTTGCAGGTTCAAACCCAGATGGGTTCTTCCAATTCCAACCAAAATCAGATTCAAATATAGTGAGCATCGACGTTGGTGGCCAGCTTTTCCAAACCACGAAACAAACACTCACCTCTGCAGGCCCCAAATCGTTCTTCTCAAGAATCGCAGAAGCCTCTTCCCCACTCTACACACCTTTTGTGGACAGAGACCCTGAACTCTTCTCTCTGCTCCTCTCCCTCCTCAGAACCGGTAACCTCCCTTCAAAGGCAAAATCCTTCGACCTTCAAGACCTCATCTTGGAGTCCCAATTCTACGGCATCGAGAACCTCCTCGTAAACTCCCTCTCCAGCCCCTCAAACTTGGAACCCTTCAACCTCCACAAATCACTCCTCTTGCCCTTGAACGGAAGGGACTCCCCTTCAACCCTCTCCACCACCCGCTACGGCTCAATCCACGTGGCGCACGGCAGCAAGATCACCACCTTCGACTGGTCCCTCCGCCGCAAATCCACCATCCTCACCCACTTCACCGCCGTGGACTCCCTCCTCGCCCTCTCCCCGTCGGTTGCCGCCGCCGGCGCCACCGACTTCTCCGGCCTACAGATCCTCGACCTCGAAAACGGACACGTCAGAGAGACCCTAAATTGGGAGAACGTGACGAGATCAGGCTCAACGGTTCAAGCCCTTGGTTCTTCCCAGGATAGCCTCTTCGTAAGCTTCGAGTCCAGCCGGAGAAACTCGAACTCCATCGTCGTCTACGATTTGCAGAGCCTGAGCCCCGTGACGGAGATTGGTCACAACGAGATTTACGGCGCCGACATCGATTCGGCGATCCCCGCGACGAAGCTGCAGTGGGTGCAAGGCTACAACCTATTAATGGCCTCCGGGTCCCACAGCGGGCCCTCCGGCGTTTTCGGGAACGTGAGGCTGTGGGATGTTCGGTCCGGGAACGTCGTCTGGGAGATGTCAGAGAAGGTTGATTGCTTCGCTGACGTGGCAGTGTCGGACGCGCTTTCCGTTATTTTTAAGGTTGGGGTGAATTCGGGGCAGGCATCCTACGTGGATCTGCGGAATCTGAGTAATAAGAACAACAACACGTGGGTTTGTCTGGGGGATAAGAGGAAAGTGGTGAATGGGAATGGGAAGAGGGAAGGGAATGGGTGCAGGGTGGAGACGCAAGGGAATCAGGTGTTTTGCACGAAGGGTGGGGATGTGGAGCTGTGGTCGGAGGTTGTGATGGGGTCGAAGAGGATTGGGGAATGTGGGAAGGAAGAGGGGAGGATCTTCAAGAAGAACCTCATGGGGAGGGTGCAGGATATGGGTGGTCCCAGAATTACCAATTTGGCCTTCGGTGGGAGCAGGATGTTCTTGACTAGGAAGGACCAGCAATGTGTCGAGGTTTGGCAGAGTTCTTCTAGGGAGCTTTGA 1419 0.5518 MPPFAGSNPDGFFQFQPKSDSNIVSIDVGGQLFQTTKQTLTSAGPKSFFSRIAEASSPLYTPFVDRDPELFSLLLSLLRTGNLPSKAKSFDLQDLILESQFYGIENLLVNSLSSPSNLEPFNLHKSLLLPLNGRDSPSTLSTTRYGSIHVAHGSKITTFDWSLRRKSTILTHFTAVDSLLALSPSVAAAGATDFSGLQILDLENGHVRETLNWENVTRSGSTVQALGSSQDSLFVSFESSRRNSNSIVVYDLQSLSPVTEIGHNEIYGADIDSAIPATKLQWVQGYNLLMASGSHSGPSGVFGNVRLWDVRSGNVVWEMSEKVDCFADVAVSDALSVIFKVGVNSGQASYVDLRNLSNKNNNTWVCLGDKRKVVNGNGKREGNGCRVETQGNQVFCTKGGDVELWSEVVMGSKRIGECGKEEGRIFKKNLMGRVQDMGGPRITNLAFGGSRMFLTRKDQQCVEVWQSSSREL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2747 472 Pfam BTB/POZ domain 24 110 IPR003131 GO:0051260
Dod04g2747 472 SUPERFAMILY DPP6 N-terminal domain-like 187 465 - -
Dod04g2747 472 PANTHER PROTEIN BINDING PROTEIN 1 470 - -
Dod04g2747 472 Gene3D Potassium Channel Kv1.1; Chain A 15 114 IPR011333 -
Dod04g2747 472 SUPERFAMILY POZ domain 21 109 IPR011333 -
Dod04g2747 472 SMART BTB_4 22 119 IPR000210 GO:0005515
Dod04g2747 472 Gene3D - 139 472 IPR015943 GO:0005515
Dod04g2747 472 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 1 470 IPR045068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2747 Dod-Chr4 51381282 51383247 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2747 - - gmx:100797171 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2747 04 51381282 51383247 Dod04g2747 04 51381282 51383247 ECH