Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2745 ATGTGGATTCTAGGTTGGAAAGGGCCATCGGGGTTCTCTGCTTCCTCGACGGCGGAGCAAGTCACTCAAGGGATTGATGCACACGGTCTCACCGCCATCGTTACAGGGGCGTCAAGTGGTCTTGGTCTTGAGACCACCCGCGTTCTTGCGTTGCGCGGTGTCCATGTTGTTATGGCAGTAAGGAATGTGGAATCTGGTGCAAATGTCAAAAAAACAATACTTAAGGAAATCCCCACTGCCGAAATTGATGTTATGGAGTTAGATCTTAGCTCTATGGCATCAGTTAGAAAATTTGCGGCAGATTATAATTCATCTGGTTTTCCACTCAATATCCTAATTAACAATGCAGGGGTGATGGCAACTCCATTCCTTCTTTCTCAAGACAACATCGAATTGCAGTTTGCAACCAATCATTTAGGTCATTTTCTCTTGACAAACCTTCTATTAGAAACTATGAAAAAAACTGTCCATGAATGCAACCGGGAGGGAAGGATAGTTATTCTATCATCAGAGGCACACAGATTTGCATATAGTGAAGGAATTCGTTTCGATAAGATCAATGATGAATCGGGATACAGCAGTTATTTTTCTTATGGACAATCAAAGCTTGCTAATATTTTGCACGCAAAAGAACTTGCAAGGCGCTTGCAGGAAGAAGGAGTCGAAATAACTGTTAACTCCCTTCATCCAGGGTCAATTCTTACAAATATTCTGCGTTACCATGGTTACATTAATGCCATTGCTAATATGGTGGGCAAGTACTTCCTTAAAAATGTGCAACAGGGAGCTGCAACTCAATGTTACGTTGCATTGCATCCAGAAGTCAAGGGAATATCTGGTTCCTATATCGGTTATACAAACGCGCAGGTGGTGAATGCTACAATTACAAATATTCATATGCACAGCGGCAGAAGTATACCCTTGTATTTATTTATCTACGCATGTGATCTTTCTCGTATTTCTTTGTATGAGAATGACACGAATATGAAACGTCGTATGTAA 1002 0.4142 MWILGWKGPSGFSASSTAEQVTQGIDAHGLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVESGANVKKTILKEIPTAEIDVMELDLSSMASVRKFAADYNSSGFPLNILINNAGVMATPFLLSQDNIELQFATNHLGHFLLTNLLLETMKKTVHECNREGRIVILSSEAHRFAYSEGIRFDKINDESGYSSYFSYGQSKLANILHAKELARRLQEEGVEITVNSLHPGSILTNILRYHGYINAIANMVGKYFLKNVQQGAATQCYVALHPEVKGISGSYIGYTNAQVVNATITNIHMHSGRSIPLYLFIYACDLSRISLYENDTNMKRRM* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2745 333 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Dod04g2745 333 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Dod04g2745 333 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Dod04g2745 333 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Dod04g2745 333 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Dod04g2745 333 Gene3D - 20 301 - -
Dod04g2745 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 284 IPR036291 -
Dod04g2745 333 Pfam short chain dehydrogenase 31 177 IPR002347 -
Dod04g2745 333 CDD retinol-DH_like_SDR_c_like 29 284 - -
Dod04g2745 333 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 294 - -
Dod04g2745 333 PANTHER RETINOL DEHYDROGENASE 2 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2745 Dod-Chr4 51367068 51371314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2745 33 240 Acyl Lipid Metabolism Gene Families AT1G63380 26.667 2.31e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2745 - K19329 gmx:100785176 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2745 04 51367068 51371314 Dod04g2745 04 51367068 51371314 ECH