Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2735 ATGTCTGGATGCAATAAATCGCCTAAAAATGATCAACATTCAATCAAATATAAGCTGAATCAATGTGGGGGAGCATCCTTTGAGGCTGATCTTTCCTGTGTAAATTATAAGCCTTCTCTTTCCAATAATGAGAATAAGAAATGCTACACAAGTTCTGAACTGAAGCCCCCTGAGATTCTGAGCACAGCTCAGCTCATCGCTGCAGTAGGCCAGTTATGGGATTCTGCTAGTCGTCCTCTTTCATTTTTACTCAGGGAGGAGAATGTGAATCAAGATGATAAAGGGCTCCCCATAAAGAGAATTCCTGATGGCACTGATGTGAAAAGCAATGGAGGGGTATGTAGTTCAAATAGCACTAATTACTTTGATGTTCATACTGGGGCTACTGGCTATGGTTCACAGATTGTGCAGGAAAGATTGGATTTCCCTAAGTTGACACAGAAAGTGTTAACACTTGAATCTAGTAATGAAAGCCAGGATTATATTCATTCTTTGTTCCAGAGATTTTTGCCGGCCACTGATAACAATTTAAATGAATATCATAAAGAAGTGGAACTTGGGAGCGAGAAAATCTCGCCTAGATCAGGAAATGTGTATTGGTGGATGATGAATGCACCTAAAGGACTAAAATATCTTGTCAAGGCTATGGATCATGAGAACATGAAAAGTAGTTCTCCAGCAGGTGGGAGCTGCATTTCAATAGATACAACCACCCCGGCATTGACTAATGAGAGTGATCTTTGCAATCCTGATTTAGTCATACATGAAGGTGTACCATTATCCAATGATGCAATTCTGGACACAGAAAATGGTAGCCATCTGTGTTCAGACTATTTTCTTCAAGTTTTGCCTGATACAAAGGCAGATGTTAGTCCTTGCCAGACCTCGTTTTCTAGTATCTATTTGGACTATCACATTAGCTCTATAGCTACCTGTAATAGTGCTTCTTTGCAGTGCCAACATAAGATTGATGATAATGAATTGCTGAAATTTTCAAAAGGACATTTCTCAGATATGACTGATGATGAACCTAAGGTTCAGAGCTTCTCCACAACCCTTCAGAAGCCTTGTTACTCCATTGCGAAGCAAGAGCATGCTTTTTCTGGGGCATTGGCTGGTGTATGTGTTAGCCTTTGTCTGCATCCTGTTGACACGATTAAGACAGTCGTTCAATCATGCCGTGCTGAACAGAGGTCCATTTTTCACATTGGCAAATCAATTGTTTCTGATAGAGGGTTGCTTGGCCTATATCGTGGAATTACTACAAACATTACATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCACCTATGAAACAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTTATTTTTACTCCCAGTGAACGAATAAAGCAGCAGATGCAAGTTGGGTCTCATTATCGCAGCTGCTGGGATGCTTTGGTTGGAATTATCAGAAATGGTGGTCTTCCCTCCCTATATGCAGGTTGGGGAGCTGTACTGTGCCGAAATATTCCACATTCAATTATCAAGTTTTATACATATGAAAGCTTGAAGCAAGTGATGCCATCTTTGCCATCTAGTTTGCAACCTAACACATTTCAGACGTTAGTATGCGGAGGATTAGCTGGATCTACTGCTGCTTTTTTCACCACTCCTTTTGATGTGATCAAGACGAGATTACAGACACAGATTCCTGGCTCTATGAATCAATATGATAACGTATTCCATGCCCTTTACAAAATTAGCAGGAGTGAAGGTTTGAAGGGCCTGTACAGGGGTTTGACGCCACGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCATCGTATGAATTTTTCAAGAGGGTGTTTTCTTTGGAAGCATCCCACCCCACTGATTCACACGTCCAGAAATGTTGA 1953 0.4091 MSGCNKSPKNDQHSIKYKLNQCGGASFEADLSCVNYKPSLSNNENKKCYTSSELKPPEILSTAQLIAAVGQLWDSASRPLSFLLREENVNQDDKGLPIKRIPDGTDVKSNGGVCSSNSTNYFDVHTGATGYGSQIVQERLDFPKLTQKVLTLESSNESQDYIHSLFQRFLPATDNNLNEYHKEVELGSEKISPRSGNVYWWMMNAPKGLKYLVKAMDHENMKSSSPAGGSCISIDTTTPALTNESDLCNPDLVIHEGVPLSNDAILDTENGSHLCSDYFLQVLPDTKADVSPCQTSFSSIYLDYHISSIATCNSASLQCQHKIDDNELLKFSKGHFSDMTDDEPKVQSFSTTLQKPCYSIAKQEHAFSGALAGVCVSLCLHPVDTIKTVVQSCRAEQRSIFHIGKSIVSDRGLLGLYRGITTNITCSAPISAVYTFTYETVKAALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRSCWDALVGIIRNGGLPSLYAGWGAVLCRNIPHSIIKFYTYESLKQVMPSLPSSLQPNTFQTLVCGGLAGSTAAFFTTPFDVIKTRLQTQIPGSMNQYDNVFHALYKISRSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRVFSLEASHPTDSHVQKC* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2735 650 ProSiteProfiles Solute carrier (Solcar) repeat profile. 453 536 IPR018108 -
Dod04g2735 650 SUPERFAMILY Mitochondrial carrier 364 631 IPR023395 -
Dod04g2735 650 ProSiteProfiles Solute carrier (Solcar) repeat profile. 360 444 IPR018108 -
Dod04g2735 650 Gene3D Mitochondrial carrier domain 329 452 IPR023395 -
Dod04g2735 650 Gene3D Mitochondrial carrier domain 453 648 IPR023395 -
Dod04g2735 650 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 645 - -
Dod04g2735 650 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 645 - -
Dod04g2735 650 ProSiteProfiles Solute carrier (Solcar) repeat profile. 546 634 IPR018108 -
Dod04g2735 650 Pfam Mitochondrial carrier protein 547 636 IPR018108 -
Dod04g2735 650 Pfam Mitochondrial carrier protein 454 537 IPR018108 -
Dod04g2735 650 Pfam Mitochondrial carrier protein 364 445 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2735 Dod-Chr4 51292167 51296960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2735 366 635 EF-hand Containing Proteins AT2G35800 30.996 1.37e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2735 - - gmx:100812271 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2735 04 51292167 51296960 Dod04g2735 04 51292167 51296960 ECH