Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2734 ATGGGGAATCGGCGGTTCACTCAGGTAGCAACCAGCGACGATGAAGAAGAAGAAGGAGATGGCCAACCACCCCCTCGTCCCAAGCAGCATCATCATCAGCAATCTCCTTCTTCGAAGCAGAAGCAGAAGCAGAAGCAGCAGCAGCAGCAGCAGCGCAGGAGGAAGCGCATGAAGCTCCAGGACGAAGAAGACGACGAAGAGGAGCAGCAGCACCGGGAAGAGGAAGAAGAACAAGAGGATCGCAGGAGAAAGAAGAGGAAGTCGAAGGAGAAGCAAGAGGAACGGTCCACCGAAGAAGAGGAAACCCCTCAGGAGGACGCCAAGCCCATTGGCGACCCAGTTAGGGTTTCCGGCAAAGGAAGAGGCAGAAGGAAGCACTACGACTCATTCGAGTTCGATGGAAACCAATACACTCTCGAGGACCCTGTACTTCTCGTTCCTGAGGATAAGGACCAGAAGCCATATGTGGCGATTATTAAGGACATTACACAGTCCCTCAATGGCAGCATGATGGTTACAGGGCAGTGGTTTTACCGTCCTGAAGAAGCAGAAAAAAAAGGTGGTGGCAGCTGGCAATCACGTGATACGAGAGAGCTCTTTTATAGTTTCCACCGTGATGAGGTTCCTGCAGAGTCTGTTATGCATAAGTGTGTGGTGCATTTTGTTCCCATTCACAAACAGCTTCCAAATCGTAAGCAGCATCCTGGGTTTATTGTGCAAAAGGTGTATGATACAGTAGAAAAGAAACTCTGGAAACTGACTGATAAGGACTATGAAGACAACAAACAGCAAGAAATTGATGAGCTCGTCCAGAAAACTCTTCAACGATTGGGTGAACTACTTGACATAGAGACTGACGAAGCTCCTGTTGATCAGGAAGATGTGATGAAAAGTAAACGAATCTTAAGGAAAAAGAGCATTTCCCCCCTTGATGTTTCAAGGGAAGAGGAAACAGGTCGTAAGGGTGACCAACATCTTAAACCTGAGACACCAGGGAGTTGTGTAAGTAATACCTCAGAGCATTATCGCATATTAGTGGATTTCAATGCACTAACAGGAGATACCCATCGTGACAAAGTTCTGGAGAAGTTGCTTCAAAGTGTTCAGTATGTGTTTAATTCTGATGACAGCATAAAGAAGGAAGAGAAAGGGAATGAGAATTCTGATCCAATCAACAATGGAAGCAATAATAAAAGTTTAGAATCAGCAAATGAAGGTGAAGATAAGGTTCAAAAGAGTTCCAAATCTTTCATCTGGCCGGATGTTGCTGTTTCAGCTGTAGTTGCTCTGGAAAATGCTTCACATGATTCTTTTTTGTTAGATTATCAGAAGTATAACCAAAAGTTACGGCAATTAGTATTTAATCTGAAGAACAACGCGTTGCTAGCACGCCGTCTATTAAATGGAGAGTTGGAACCTTCAAAAATATTGAATATGACGCCCAATGAATTGAAGGAGGGTTTGACTGCTGATGAAATATCCAAGAAGGAGCCTGATGAGTCACAGCACATGCAGATGACTGATGCCCGCTGCTCAAGATGCACGGAGTGCAAGGTGGGCTTGAGGGACATTATCCATGCAGGACATGGCGACCGATATCAGCTGGAATGTATTGCCTGTGGCCACACCTGGTATGCCTCCCGTGATGAGGTGACTATGCTGACCATAGATTCATCAGATTCAAAAAGAAGTGTAGGCACAGCACCATGGGCCACTGCTAAATTTGAGAGTGTTGAGAAGAAGCTAGTGAGTCCCCGCGAATCTGAAAAGTCTGGCAATGATGTCTTTAAGAAAACAAGTGAAGCTTATATGCCTGTTTTGGAGGCCCAAAAATCATTCGGCAGGGCTCTGGATTCATCAATGGGACAAGAGTTGGGGTTGGAGTTGAATATCAGTGTCAAGTCTTCAGTGGGTCTGAGTCCCAATACTGTTCTTCCACCTCATCAATATTGTTTGAATGTGAAGAAGGGATCCAAAAAGGGAAAACCCACAGGGAAAGATGACCTTTTAACCCTCAAGGGGGATTTTGCAGATATCAAGCTCGCTCGCTTCCGCAGCTCTTCATGTAAGAGTCTTCTTTCTAGACCTCATGGATTGGGAGGTAATGTAGAAATGAGGCGTGGTTCCGAGTATCAGAGTTCAGAAGAAGTGAAAAATATAAAGAAAATGGGCACCGGGGGAAGGAAAAAAATTGAAATTTCAATGAGTGAGACCTCTTTCTCGGGTAGCATTGTTGATTCTTTATGTGGATCAGATGACGAAGGTTCTGAGCAGAGATTTTCCAGGTCCTGTGCTTCCGTGGAGCCAAACTCTCCAGATGGCTTTATTGAATTCTGCGTAAGTTCAGATGCAAGGCGTAAACGCTCTACTGCTGTATATGGGAGAGATTCTATAAATTTGAAGTTCAGAACTGATAGAAGTGCTGATTCTCTAATCGATGGCAATGTTCCTCTTGGGAAGGACATGGTTCGTGCACTGCATAAGTCGGTATCTGCTAAGGTGCATTTCTCCCACCTGCTGCTATCACCATCAGAAAGTGATTGCTCATCAAGGGCGAGTCCGAAAGTTGGATTCACACCTATCAAGAAAAGGATGAATCAATTCACAAAGTCAAAATCTTTGAGAAGTCCAGTGAGTCATAAGCTGGAAACTAATGAGGTCAAATCAAATGAGACGGCAAACATTACAAGAAACAGGACTTATCAGAAGTCTTTGCTAAGTGACTTATCCAAAACAGCAAAGCAGTCTGACATTATTTCCGAGTTCATCGATAGAGAAATCCAGTATTCAGGTATAGCAGCTTCACCAGTTCACCTGCATGGTAATCTCAAGTTGGAAAACAGACATGGAGTGCCATGTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTCTTTGTGGCCAAGGCACGGAGAGTTGGTAATGCTTTCAGTTGGGCATATACCTTCCACTCCATTGACAATAGAAAGAAGAGCAGTGCGAGTGCAACTGGCTTGGAGTCCCATGATTTTGACAAAGACTCCTCAGTGGTAGCACAGATGCTAGTTTCCTGCAACTTATGTCAACAAGAAAGCAAAGTATTTGACATGTCTATGGTGACAGAATTTGTGCTGTATGATCTTACACACTCAAGACAAAGTGTTTCACAGGAAACAAAGTCTTGTTGTGAACAAGATGCTTCTACAACTCTAAAAGCTTCCCGTGTTGGATTGAAGGAAGAAACTTTCAGGCTGGATGAAGATAATCTTGCAAGTAAAAACAAACTTCAAGACAGGCCTCCATCACGCAATGTTGAATTTGATAATTCAAATTCCTATCCTTCATTGTCCACCAGATCAAATTCAAACCCTGAAATTGCTGCCATTGTTTTGCAAATTCCATTTTCTAGGAGAGAAAGCTTGAAGTACAGGGGAGGGGATAGAATAAGTGCTGAAGAGTATTCCAACATAAGTGATCTCTCTGCAGCAGTAGATCAGAGTAGAAAGAGCCTTCATGAAAGCAAAATCCAGGAACAGGTGAAGGTGGTAATACCAATAGGTAACCATGGTTTGCCAAATGCCGAAAGTCAGGGTCCCTCTTCGTTACTTGATCGATTGAGACAAGGTGGAGGTTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCAAGTATTCAATTTGCTGAAGACCGCCCTCTAATGGAGGAATATCAACCACTGGAACTTTTCGTTCAGGGAACAAAAGAACGCAGTCCTACCTTCAGCATGACAATACTAGAAGAGGGCCAATATGCTGTGGATTTTCATGCACAGTTATCCACATTACAAGCATTCTCCATCTGTGTTGCCATTTTGCATGGCAGTTCCACTATCAGTGGCGAGAAACCCCAACAGTTATCTCAGTGCAGCTCATTGAAGATGCTTCTTGAGGATGACGTAGAGTTTTATATCAAATCAGTCACATCCGAGGAGAAGAAGACAGTGGCCAAGACTAGGAAAGGAATTCCCCGATCCTATGTGCCGAACCCACCCTTTTCTCCTATTGCGCGAGTATAA 4050 0.4415 MGNRRFTQVATSDDEEEEGDGQPPPRPKQHHHQQSPSSKQKQKQKQQQQQQRRRKRMKLQDEEDDEEEQQHREEEEEQEDRRRKKRKSKEKQEERSTEEEETPQEDAKPIGDPVRVSGKGRGRRKHYDSFEFDGNQYTLEDPVLLVPEDKDQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAEKKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPIHKQLPNRKQHPGFIVQKVYDTVEKKLWKLTDKDYEDNKQQEIDELVQKTLQRLGELLDIETDEAPVDQEDVMKSKRILRKKSISPLDVSREEETGRKGDQHLKPETPGSCVSNTSEHYRILVDFNALTGDTHRDKVLEKLLQSVQYVFNSDDSIKKEEKGNENSDPINNGSNNKSLESANEGEDKVQKSSKSFIWPDVAVSAVVALENASHDSFLLDYQKYNQKLRQLVFNLKNNALLARRLLNGELEPSKILNMTPNELKEGLTADEISKKEPDESQHMQMTDARCSRCTECKVGLRDIIHAGHGDRYQLECIACGHTWYASRDEVTMLTIDSSDSKRSVGTAPWATAKFESVEKKLVSPRESEKSGNDVFKKTSEAYMPVLEAQKSFGRALDSSMGQELGLELNISVKSSVGLSPNTVLPPHQYCLNVKKGSKKGKPTGKDDLLTLKGDFADIKLARFRSSSCKSLLSRPHGLGGNVEMRRGSEYQSSEEVKNIKKMGTGGRKKIEISMSETSFSGSIVDSLCGSDDEGSEQRFSRSCASVEPNSPDGFIEFCVSSDARRKRSTAVYGRDSINLKFRTDRSADSLIDGNVPLGKDMVRALHKSVSAKVHFSHLLLSPSESDCSSRASPKVGFTPIKKRMNQFTKSKSLRSPVSHKLETNEVKSNETANITRNRTYQKSLLSDLSKTAKQSDIISEFIDREIQYSGIAASPVHLHGNLKLENRHGVPCFEFKVKCPEDVFVAKARRVGNAFSWAYTFHSIDNRKKSSASATGLESHDFDKDSSVVAQMLVSCNLCQQESKVFDMSMVTEFVLYDLTHSRQSVSQETKSCCEQDASTTLKASRVGLKEETFRLDEDNLASKNKLQDRPPSRNVEFDNSNSYPSLSTRSNSNPEIAAIVLQIPFSRRESLKYRGGDRISAEEYSNISDLSAAVDQSRKSLHESKIQEQVKVVIPIGNHGLPNAESQGPSSLLDRLRQGGGCDCGGWDMACPLILLGNPSIQFAEDRPLMEEYQPLELFVQGTKERSPTFSMTILEEGQYAVDFHAQLSTLQAFSICVAILHGSSTISGEKPQQLSQCSSLKMLLEDDVEFYIKSVTSEEKKTVAKTRKGIPRSYVPNPPFSPIARV* 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2734 1349 MobiDBLite consensus disorder prediction 1095 1112 - -
Dod04g2734 1349 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 627 1349 - -
Dod04g2734 1349 MobiDBLite consensus disorder prediction 1081 1112 - -
Dod04g2734 1349 Pfam BAH domain 136 252 IPR001025 GO:0003682
Dod04g2734 1349 MobiDBLite consensus disorder prediction 75 108 - -
Dod04g2734 1349 Pfam Domain of unknown function (DUF3527) 936 1285 IPR021916 -
Dod04g2734 1349 ProSiteProfiles TFIIS central domain profile. 356 512 IPR003618 GO:0006351
Dod04g2734 1349 PANTHER EXPRESSED PROTEIN 627 1349 - -
Dod04g2734 1349 SMART mid_6 389 494 IPR003618 GO:0006351
Dod04g2734 1349 MobiDBLite consensus disorder prediction 310 335 - -
Dod04g2734 1349 Gene3D - 99 271 IPR043151 -
Dod04g2734 1349 MobiDBLite consensus disorder prediction 1 127 - -
Dod04g2734 1349 Gene3D - 337 486 IPR036575 GO:0006351
Dod04g2734 1349 SUPERFAMILY Elongation factor TFIIS domain 2 351 485 IPR036575 GO:0006351
Dod04g2734 1349 Coils Coil 45 101 - -
Dod04g2734 1349 Pfam Transcription factor S-II (TFIIS), central domain 352 503 IPR003618 GO:0006351
Dod04g2734 1349 CDD BAH_plant_3 117 263 - -
Dod04g2734 1349 SMART BAH_4 135 254 IPR001025 GO:0003682
Dod04g2734 1349 MobiDBLite consensus disorder prediction 310 327 - -
Dod04g2734 1349 ProSiteProfiles BAH domain profile. 135 254 IPR001025 GO:0003682
Dod04g2734 1349 MobiDBLite consensus disorder prediction 379 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2734 Dod-Chr4 51279212 51291313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2734 - - cam:101501082 1747.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1097 02 13636069 13640088 Dod04g2734 04 51279212 51291313 PCT