Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2733 ATGGCTGAATCCATTGCTACCACTTCACTCCTTGGCCACCGTCCTGTCTGTGAAGGAAATTTGATCAGGGATGTCTCTGGCAAACGCAAATCTTTGAGTTCGTGTAGGTTCCCAACAACTGAATTTCTTGGTGGAAGGATTGCTGTTTCTCTGCCTGTGCCAAAATCCAAGAAGAATGGGTTCTTGTCATCCTCAATTAGGGCCCTTGCTGTGGAGCTCACAAGAGAAGCATATTCATACAGGGAAGACAGACTGCCCAAGAAGGATAATGGCAAGATTGATAGTGGCTTTGATCCAAGGCCTGGTTTATGGCCTCCTACAAATAGAGCAGATAACCCTTCGCTTCGGAATCCTTTGCTTCGACAAGAGAGGATGGGATGTGGCTGGTTAGGTGCTATATTTGAATGGGAAGGGGTTCTCATTGAAGACAACCCTGATCTTGAGAAGCAAGCTTGGCTAGCCCTTTCCCAAGAAGAAGGAAAATCCCCTCCTCTGGCATTCATCCTGAAGAGAATAGAAGGCATGAAGAACGAACAAGCAATTTCCGAAGTTCTGTGCTGGTCCAGGGACCCGACGCAGTTAAGAAGAATGGCTAATAGAAAGGAAGAAATCTACCAATCTTTGCAAGGAGGGATATATAGTCTCATGCCGGGTTCCAAAGAGTTTGTGAGTGTCTTGATGCATTATAAGATACCAATGGCATTGGTTTCCACCCGTCCTAGAAAAACCCTTGAAGCTGCTATAGGGCAAATTGGTATTGGAGACACTTTCAGTGTTGTTGTAGCAGCAGAAGATGTTCACAGGGGAAAACCTGATCCGGAGATGTTTGTGTATGCAGCACAGCTCTTGAACTTCATACCTGAGAGATGCATTGTGTTTGGAAACTCTAATCAAACAGTGGAGGCTGCACATGATGCAAGGATGAAGTGTGTGGCAGTAGCTAGCAAGCATCCTGTCTATGAACTTGGGGCTGCAGACTTAGTTGTGAAGCGCCTAAATGAGCTTTCAGTTGTTGATTTGAAGAACCTGGCTGACATTGAATCAGCTGAATTTGGATCTGGGGAGCCTGCAGTGGAGATGGAGATGGAAATAGACTCAGACACATCGTCTGTTGATAACAGTTTCTGGTGA 1131 0.4571 MAESIATTSLLGHRPVCEGNLIRDVSGKRKSLSSCRFPTTEFLGGRIAVSLPVPKSKKNGFLSSSIRALAVELTREAYSYREDRLPKKDNGKIDSGFDPRPGLWPPTNRADNPSLRNPLLRQERMGCGWLGAIFEWEGVLIEDNPDLEKQAWLALSQEEGKSPPLAFILKRIEGMKNEQAISEVLCWSRDPTQLRRMANRKEEIYQSLQGGIYSLMPGSKEFVSVLMHYKIPMALVSTRPRKTLEAAIGQIGIGDTFSVVVAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVKRLNELSVVDLKNLADIESAEFGSGEPAVEMEMEIDSDTSSVDNSFW* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2733 376 CDD HAD_BPGM-like 193 315 - -
Dod04g2733 376 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 233 313 IPR006439 -
Dod04g2733 376 Pfam Haloacid dehalogenase-like hydrolase 154 313 IPR041492 -
Dod04g2733 376 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 371 - -
Dod04g2733 376 SUPERFAMILY HAD-like 132 335 IPR036412 -
Dod04g2733 376 Gene3D Putative phosphatase; domain 2 142 215 IPR023198 -
Dod04g2733 376 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 371 - -
Dod04g2733 376 MobiDBLite consensus disorder prediction 87 115 - -
Dod04g2733 376 Gene3D - 132 330 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2733 Dod-Chr4 51272973 51275108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2733 K22912 - gmx:100798181 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2733 04 51272973 51275108 Dod04g2733 04 51272973 51275108 ECH