Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2732 ATGGTTTTCGTTTCCCGAGCTGCTTCTTCACCGTCACAGTGTATGCGCCATGACATCGTGATACGGCACGAGTTCGATTGGTCCAATGCTAGGAGAACCCGCGTTGCTTTTTCTTCCACCTCGTGGGATTCTGCTAAGAAGGCTCAGGTTTCCCAGAAGAGTGTTTTAGTTGGTGGGCGTGGGCGGGGCCGCAGCGTGATTGTTGCTGCCAGCCCTCCCACTGAAGATGCTGTGGTTGTCACTGAGCCACTTACCAAGAAGGATCTTGTTGATTATCTTGCCTCTGGTTGCAAGACCAAGGATAAATGGAGGATAGGTACTGAACATGAGAAGTTCGGCTTTGAGTTTGGAAGCTTGCGTCCAATGAAGTATGAGCAAATAGCAGAATTGCTGAATGGCATTGCTGAGAGATTTGACTGGGATAAAGTAGTGGAAGATGATAAAATTATTGGACTGAAACAGGGGAAACAGAGCATATCATTGGAGCCAGGTGGTCAGTTTGAGCTTAGTGGAGCCCCTCTTGAAACCTTGCATCAGACTTGCGCTGAAGTTAATTCACATCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGCGAATCAAAGACATACCTATAATGCCAAAGGGAAGATATGAGATTATGAGGAATTACATGCCCAAAGTCGGTTCTCTTGGTCTTGACATGATGTTCAGAACATGCACTGTTCAGGTCAATCTGGACTTTAGTTCTGAAGCCGACATGATCAGGAAATTCCGTGCTGGCTTAGCTCTGCAGCCTATAGCAACAGCTCTTTTTGCAAATTCACCATTCACAGAAGGAAAACCAAATGGTTTTGTCAGTATGAGAAGCCATATTTGGACTGATACTGATAAGGATCGCACAGGCATGCTACCTTTTGTTTTTGATGACTCGTTTGGGTTTGAGCAGTATGTTGATTATGCCCTCGATGTTCCAATGTATTTTGTCTATCGGAAAAAGAAATACATCAACTGTACTGGGATGACCTTCAGGGACTTCTTGGCTGGAAGGCTTCCTTGTATTCCCGGTGAATTACCTACCCTCAATGATTGGGAGAATCACTTGACAACTATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGCGCTGATGGAGGGCCCTGGAGAAGGTTATGTGCATTACCAGCATTTTGGGTAGGGCTACTGTATGATGAGGTTTCTCTACAAAATGTTTTAGACATGACAGCAGATTGGACTGCAGAAGAAAGACAAATGCTAAGGAACAAGGTTCCCATAACTGGCCTAAAGACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTGCAGTTGGCAAGGGATGGCTTGGAAAGAAGAGGCTTCAAGGAAACAGGATTTTTGAATGAGGTAGCTGAAGTGGTTAGAACAGGTGTCACTCCAGCTGAGAAGCTCCTGGAACTGTATCATGGAAAGTGGGGGCAATCCGTAGATCATGTATATGAGGAATTGCTTTATTGA 1554 0.4511 MVFVSRAASSPSQCMRHDIVIRHEFDWSNARRTRVAFSSTSWDSAKKAQVSQKSVLVGGRGRGRSVIVAASPPTEDAVVVTEPLTKKDLVDYLASGCKTKDKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGIAERFDWDKVVEDDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWRIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYINCTGMTFRDFLAGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDMTADWTAEERQMLRNKVPITGLKTPFRDGLLKHVAEDVLQLARDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLELYHGKWGQSVDHVYEELLY* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2732 517 Pfam Glutamate-cysteine ligase family 2(GCS2) 135 427 IPR006336 GO:0004357|GO:0042398
Dod04g2732 517 Gene3D - 69 517 - -
Dod04g2732 517 PIRSF GCL 68 517 IPR035434 GO:0004357|GO:0006750
Dod04g2732 517 SUPERFAMILY Glutamine synthetase/guanido kinase 95 515 IPR014746 GO:0003824
Dod04g2732 517 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 39 517 IPR035434 GO:0004357|GO:0006750
Dod04g2732 517 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 83 517 IPR011556 GO:0004357|GO:0006750
Dod04g2732 517 PANTHER GLUTAMATE--CYSTEINE LIGASE 39 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2732 Dod-Chr4 51255829 51263418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2732 K01919 - gmx:547545 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2732 04 51255829 51263418 Dod04g2732 04 51255829 51263418 ECH
Dod02g1093 02 13614593 13620110 Dod04g2732 04 51255829 51263418 PCT