Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2725 ATGATGATGAACAACCTGAAGTTAGGGATAGATGTGGTTAGTGCCCACAATCTGCTGCCTAAAGATGGACAAGGTTCATCCAGCGCCTACGTGGAGCTTTATTTTGATGGTCAAAAGTTTCGTACCACTATCAAAGAAAGGGATCTCAACCCGGTTTGGAATGAGACCTTCTACTTCAACATATCTGATCCTTCCAATCTTCACTTTCTGACACTTGATGCCTATGTCTACAACCATGCCAGAGCTACCAACTCCAGTTCATTTCTTGGAAAAGTTAGCCTCACTGGGACTTCTTTTGTCCCTTACTGTGATGCTGTTGTCCTGCACTATCCATTAGAAAAGCGTGGTATTTTCTCTCGTGTAAGAGGAGAGATTGGCCTAAAAGTTTATATGACTAATGATCAAGCTATTAAATCCTCAATTCCAATTCCTGCTGCTGAGTCTATGCCAACAAATAATCCAAGTTTAGTACATGCAGAAGCTCACGGACCTACAAATTCTGTGACAAACATTGTGTCTAATGGAAAGGTTGAGACAAGGCACACATTTCATCATCTACCTAATCCAAACCTTCAGCAGCATCAGCATCAACATCAACATCATTCTCCTGGCTTTGCAGATAGACATTATGTAACAAAGTATGAAGCCGATGAAATGAAATCTGAACAACAACCTCCCAAGCTAGTCCTGATGCGTGCTGCATCAGTACAACCAGCTGACTATGCCCTTAAAGAGACAAGTCCATATCTTGGTGGGGGAAGAGTTGTTGGAGGTCGTGTCATTCATAAAGACAAGACATCAAGCACATATGATCTTGTGGAGAGGATGTATTTCCTCTATGTTAGGGTAGTCAAGGCTCGTGAACTTCCTTCTATGGATGTCACCGGGAGCCTTGATCCATTTGTTGAGGTAAGAATTGGAAATTACAAAGGCATTACCAAACACTTTGATAAGAATCAGAATCCAGAATGGAATCAGGTGTTTGCCTTTTCAAAGGACAGGATGCAGGCATCTATATTGGAAGTTGTGATCAAGGACAAGGATTTAGTGAAAGATGATTTTGTAGGCATTTTGAGGTTTGACATCAATGAAGTTCCTTTGAGAGTGCCGCCAGATAGCCCTTTGGCACCACAGTGGTACAGACTAGAGGACAAGAAGGGGGAAAAGGTGAAGGGTGAGTTGATGCTTGCTGTGTGGATTGGTACGCAAGCGGATGAGGCTTTTTCTGATGCATGGCATTCAGATGCAACCACACCTGTTGACAGCACAGCTGTTGCATCCACAGTGTTGCGTTCCAAGGTCTATCACGCACCAAGGCTATGGTATGTGCGAGTCAATGTTGTAGGAGCGCAAGACCTGGTTCCTACTGAGAAAAACCGTTTTCCTGATGTGTATGTCAAGGCACATATAGGAAACCAAGTGCTGAAAACAAAGACAGTTCCAGCTAGGAATCTGAATCCTCTCTGGAATGAGGATCTTTTGTTTGTTGCAGCAGAACCTTTTGAAGATCATCTAGTACTTACAGTTGAAGATAGAGTTGAACCGGGAAAAGATGAGATCATTGGGAGGGCGATCATTCCACTGAACTCTATAGATAGGCGTGCTGATGATAGAATCATTCATTCCAGATGGTTCAACCTGGAAAAGCCAGTTGCTGTGGATGTTGATCAGCTTAAGAAAGAGAAGTTCTCTAGCAAAATTCACCTCCGTGTGTGTCTTGATGGAGGGTACCATGTTCTTGATGAGTCAACACATTACAGCAGCGATCTTCGCCCCACGGCAAAGCAGCTATGGAGGCCACCAATTGGGGTTCTAGAACTTGGAGTGTTGAATGCTGTAGGACTCCACCCAATGAAAACAAGGGAAGGAAGGGGCACATCTGACACATACTGTGTGGCAAAATATGGTCACAAATGGGTTAGAACAAGGACCATTGTTGACAATCTGTGCCCAAAATACAATGAGCAATACACATGGGAGGTTTTTGATCCAGCAACAGTCCTCACAGTAGGTGTCTTTGACAACAGCCAGATCGGTGAAAAGGGTTCAAATGGTTCCAAAGACTTGAAAATTGGCAAGGTCAGAATCCGCATCTCAACCTTGGAAACAGGCCGAATCTACACTCACTCATATCCACTGCTAGTTCTTCACCCAACAGGAGTCAAGAAGATGGGCGAGTTGCACTTAGCAATAAGGTTCTCATGCACTTCTTTTGCAAACATGATGTACCTATACTCAAAACCACTGCTACCAAAAATGCACTACGTAAGGCCCTTCTCCCTCATGCAACTCGACATGCTACGCCACCAAGCAGTGACCATAGTGGCGGCAAGGCTCGGTAGAGCAGAGCCACCACTCCGGAAGGAAGTGGTTGAATACATGTCTGATGTGGACTCACACCTCTGGAGCATGCGCAGAAGCAAGGCAAATTTCTTCAGGCTCATGACAGTGTTCTCAGGTTTATTCGCTGTTGGAAAGTGGTTTGGTGACATCTGCATGTGGAAAAATCCTATCACCACAGTGCTAGTTCATGTCCTCTTCCTCATGCTAGTTTGCTTCCCAGAATTGATATTACCAACAGTTTTCCTCTACATGTTCTTGATTGGCGTGTGGAACTATAGGTACCGACCAAGGTACCCTCCACACATGAATACAATAATCTCACAAGCTCAAACAGTGCAACCGGATGAGTTAGATGAGGAGTTTGACACATTCCCCACAAGCAGAAACCCAGACTTTGTGAGAATGAGGTATGATAGGTTGAGGAGTGTGGCTGGGAGGATTCAAACGGTGGTTGGTGATTTGGCTAGCCAGGGTGAGAGGGTTCAGGCACTGTTGAACTGGAGAGACCCTCGTGCAACTGCCATATTCATTGTATTCTGTCTTGTTGCTGCATTGGTGCTGTATGTTACACCCTTTCAAGTGGTGGCAGCTATGGCAGGGTTCTATGTTATGAGGCATCCCAGGTTCCGCCACAGGCTTCAATCTGCACCTATTAACTTCTTCCGTAGGCTGCCTGCAAGAACAGATAGTATGTTGTAA 3042 0.4477 MMMNNLKLGIDVVSAHNLLPKDGQGSSSAYVELYFDGQKFRTTIKERDLNPVWNETFYFNISDPSNLHFLTLDAYVYNHARATNSSSFLGKVSLTGTSFVPYCDAVVLHYPLEKRGIFSRVRGEIGLKVYMTNDQAIKSSIPIPAAESMPTNNPSLVHAEAHGPTNSVTNIVSNGKVETRHTFHHLPNPNLQQHQHQHQHHSPGFADRHYVTKYEADEMKSEQQPPKLVLMRAASVQPADYALKETSPYLGGGRVVGGRVIHKDKTSSTYDLVERMYFLYVRVVKARELPSMDVTGSLDPFVEVRIGNYKGITKHFDKNQNPEWNQVFAFSKDRMQASILEVVIKDKDLVKDDFVGILRFDINEVPLRVPPDSPLAPQWYRLEDKKGEKVKGELMLAVWIGTQADEAFSDAWHSDATTPVDSTAVASTVLRSKVYHAPRLWYVRVNVVGAQDLVPTEKNRFPDVYVKAHIGNQVLKTKTVPARNLNPLWNEDLLFVAAEPFEDHLVLTVEDRVEPGKDEIIGRAIIPLNSIDRRADDRIIHSRWFNLEKPVAVDVDQLKKEKFSSKIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWRPPIGVLELGVLNAVGLHPMKTREGRGTSDTYCVAKYGHKWVRTRTIVDNLCPKYNEQYTWEVFDPATVLTVGVFDNSQIGEKGSNGSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMMYLYSKPLLPKMHYVRPFSLMQLDMLRHQAVTIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGLFAVGKWFGDICMWKNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNYRYRPRYPPHMNTIISQAQTVQPDELDEEFDTFPTSRNPDFVRMRYDRLRSVAGRIQTVVGDLASQGERVQALLNWRDPRATAIFIVFCLVAALVLYVTPFQVVAAMAGFYVMRHPRFRHRLQSAPINFFRRLPARTDSML* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2725 1013 ProSiteProfiles C2 domain profile. 586 711 IPR000008 -
Dod04g2725 1013 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 6 1013 - -
Dod04g2725 1013 CDD C2B_MCTP_PRT_plant 278 402 - -
Dod04g2725 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 145 IPR035892 -
Dod04g2725 1013 CDD C2C_MCTP_PRT_plant 442 592 - -
Dod04g2725 1013 CDD C2A_MCTP_PRT_plant 7 132 - -
Dod04g2725 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 277 418 IPR035892 -
Dod04g2725 1013 CDD C2D_MCTP_PRT_plant 604 730 - -
Dod04g2725 1013 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 6 1013 - -
Dod04g2725 1013 Pfam C2 domain 7 95 IPR000008 -
Dod04g2725 1013 Pfam C2 domain 279 380 IPR000008 -
Dod04g2725 1013 Pfam C2 domain 441 536 IPR000008 -
Dod04g2725 1013 Pfam C2 domain 604 713 IPR000008 -
Dod04g2725 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 441 594 IPR035892 -
Dod04g2725 1013 ProSiteProfiles C2 domain profile. 260 380 IPR000008 -
Dod04g2725 1013 Pfam Plant phosphoribosyltransferase C-terminal 858 1013 IPR013583 -
Dod04g2725 1013 Gene3D C2 domain 2 132 IPR035892 -
Dod04g2725 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 603 748 IPR035892 -
Dod04g2725 1013 SMART C2_3c 442 540 IPR000008 -
Dod04g2725 1013 SMART C2_3c 7 108 IPR000008 -
Dod04g2725 1013 SMART C2_3c 278 374 IPR000008 -
Dod04g2725 1013 SMART C2_3c 604 710 IPR000008 -
Dod04g2725 1013 ProSiteProfiles C2 domain profile. 421 545 IPR000008 -
Dod04g2725 1013 Gene3D C2 domain 260 400 IPR035892 -
Dod04g2725 1013 Gene3D C2 domain 588 735 IPR035892 -
Dod04g2725 1013 Gene3D C2 domain 423 573 IPR035892 -
Dod04g2725 1013 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2725 Dod-Chr4 51212789 51217519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2725 165 1013 Lipid Metabolism Gene Families AT4G11610 77.778 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2725 - - gmx:100777951 1789.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2725 04 51212789 51217519 Dod04g2725 04 51212789 51217519 ECH