Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2695 ATGGGTTTCCATGCTCTCACCAGTAGCAAATCCTTCTTCACAAGCAGAACCCACCTTCCTTTGTTTTCATCAGAGAGAAAAAGAGCAACAACGACTTCATTAACCAGAACCCTTCATTTGAATCATAGACCCAATTCATTAAGGGTCTTTGCCTCACAGGAAGAACCCCCTAAGCTCAGTAGCCAGGATCTTATGGAGCTCAAGTTTGGACGCTTACTTGGGGAGGACCCTAAGCTCACCCTTGCCAAGATAATGGGAAGAAAGACTAACCCTGATGCTACTTATCTTGATATTGAGAAATCATTTTATAAGAAGAAGGGTAAACTCGTGGAAGTAGAGGAAGTTCCATTTGAAGGTTCTAAGGAAAGAAAGCCATCGAGTAAGTTGGATGATTTGGGTTTAGTGAGACCTGTTCCAGTGAAAGGGGCAACCTTCAAATCCGATGATAACCAAGTTGCGGTGGAGGTTAAGAAACCGAGCCCAATGCAGAGCAAGGCAGGGGATGTGAAGAAAAGTAGTGTTCCTAATGTTATTCTGAGAAAGCCGACAGTGTACAAAGAGGATGATGAGGATGTGTCGTCAAGGTTGAGAATGAGACCAAATTTGTCCCTGCAAATGCGGGATGCACAAGTGAAGGAGAAGTTTAGTGACATGACACTTTTGAGGAAGCCTGAACCACCTATTGCCAAGGATGCCAATGCAAAGCAAGAGCCTTCTACTCGTTTGGACAATCAAAGGAATGATGATAATGCATTGGAGATGAGGAAAGAAGATTCAAGTGGTACAGTTGGTAACTTGATGTTGTTGGAACGACCACACAAATCAGATGGCGAAAAGGATAATGAACAATTTGCTGATGCAAAAGTGATAGTTCAAAATGAAGGATTGGAGCAGCATGGTCAGAGACATCTGGAGTTCCATCAGGAGCTGTCTGATTCAAGCCAACAGTCAGATTTAAATTCTGTTGATTCAGGAGTGGAGTTGTCTGTTGAAGCTGCGCTACAGGGAAAGCCGAAAAGATTAGACCATCATGTGAAGAAAACCTCAAATATTGAAGAGACTACCTTTATGAATTCTGGAGGTCACAGAAACAATGATGAACTAGAGAATCTCGTTGATATGACCGATTCTCAGGAAAGTGAACATGCTGATTGGACCAGGGCAGAGGATTTGATTAAGAGTGGAGATAGGGTAGAAGTGGAAATATTAAGCTGCAGTAGCAAAGGTTTCATTGTATCTTTTGGTTCTTTAATAGGATTTATGCCATACCGTAATCTTGTTTCCAAGTGGAAGTTCATAGCTTTTGAGTCATGGTTAAGACAGAAGGGCTTGAATCCATCTATCTACCAGCAAAACTTAGGCACTACTACAAGTTACGATGCTGAAAATAAAAATGTTTCTCCTAACTCTCCTCCATATCTGGAGAATGATGGTAAAGTCAAGGAGAAAATTTCTCCAGATATGAAACTGGAAGATCTGTTAAGGATTTATGACCAAGAGAAAATTAAGTTCATGTCATCATTTGTTGGGCAGAAAATCAGAGCAAATGTACTATCGGCAGACAGAAAATTTAGAAAGCTCATATTTTCACTAAGACCAAAAGAGAAGGAAGAGCTACTCGAGAAGAAGAGAAATCTGATGGCTAGACTTCAAGTTGGGGATATAGTGAAATGTTCCATCCAGAAGATAACTTACTTTGGGGTTTTTGTTGAGGTTGAAGGAGTGTCTGCACTAATTCATCAGACAGAGTTGTCGTGGGATGCCACTTTGAACCCAGCATCATACTTCAAGATTGGTCAGGTTATAGAAGCAAAAGTTCAGCAATTAGACTTTGCTCTTGGGCGCATATTTTTATCATTAAAGGAGGTCATGCCTGATCCATTAATGGATTCCTTGGAGTCTGTAGTTGGGGATCATGGTCACTTAGATGGGAGATTGGAAGAAGCTCAAACAGATGAAGAGTGGCCTGAAGTTGAATCTCTTATCAAACAATTGCAAAAGATTGAGGGGGTCCAGACTGTTTCGAAAGGTCTTTTTTTCAGAAGCCCTGGTTTAGCTCCAACATTCCAAGTTTATATGGCATCGATGTTTGAGAATCAGTACAAGTTGCTCGCTCGAGCCGGAAACAAAATGCAAGAGGTGATAGTACAGACGCCTTTAGATAAAGAAAGGATGAAATCAGTTATTATGACCTGTACCAACAGAGTGGAATAG 2214 0.4115 MGFHALTSSKSFFTSRTHLPLFSSERKRATTTSLTRTLHLNHRPNSLRVFASQEEPPKLSSQDLMELKFGRLLGEDPKLTLAKIMGRKTNPDATYLDIEKSFYKKKGKLVEVEEVPFEGSKERKPSSKLDDLGLVRPVPVKGATFKSDDNQVAVEVKKPSPMQSKAGDVKKSSVPNVILRKPTVYKEDDEDVSSRLRMRPNLSLQMRDAQVKEKFSDMTLLRKPEPPIAKDANAKQEPSTRLDNQRNDDNALEMRKEDSSGTVGNLMLLERPHKSDGEKDNEQFADAKVIVQNEGLEQHGQRHLEFHQELSDSSQQSDLNSVDSGVELSVEAALQGKPKRLDHHVKKTSNIEETTFMNSGGHRNNDELENLVDMTDSQESEHADWTRAEDLIKSGDRVEVEILSCSSKGFIVSFGSLIGFMPYRNLVSKWKFIAFESWLRQKGLNPSIYQQNLGTTTSYDAENKNVSPNSPPYLENDGKVKEKISPDMKLEDLLRIYDQEKIKFMSSFVGQKIRANVLSADRKFRKLIFSLRPKEKEELLEKKRNLMARLQVGDIVKCSIQKITYFGVFVEVEGVSALIHQTELSWDATLNPASYFKIGQVIEAKVQQLDFALGRIFLSLKEVMPDPLMDSLESVVGDHGHLDGRLEEAQTDEEWPEVESLIKQLQKIEGVQTVSKGLFFRSPGLAPTFQVYMASMFENQYKLLARAGNKMQEVIVQTPLDKERMKSVIMTCTNRVE* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2695 737 MobiDBLite consensus disorder prediction 459 478 - -
Dod04g2695 737 SMART S1_6 551 621 IPR022967 -
Dod04g2695 737 SMART S1_6 393 532 IPR022967 -
Dod04g2695 737 MobiDBLite consensus disorder prediction 241 256 - -
Dod04g2695 737 SUPERFAMILY Nucleic acid-binding proteins 380 542 IPR012340 -
Dod04g2695 737 SUPERFAMILY Nucleic acid-binding proteins 538 643 IPR012340 -
Dod04g2695 737 MobiDBLite consensus disorder prediction 215 264 - -
Dod04g2695 737 Pfam S1 RNA binding domain 550 621 IPR003029 GO:0003676
Dod04g2695 737 ProSiteProfiles S1 domain profile. 553 621 IPR003029 GO:0003676
Dod04g2695 737 Gene3D - 544 632 IPR012340 -
Dod04g2695 737 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 5 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2695 Dod-Chr4 50887500 50893517 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2695 - - lang:109342045 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2695 04 50887500 50893517 Dod04g2695 04 50887500 50893517 ECH