Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2685 ATGGTGTCGTCGTCGCCGCAAACGATCCTGGTGACTGGGGGTGCGGGGTTCATCGGCACTCATACGGCGGTTCAGCTGCTGAAGGGTGGATTTAGGGTTTCCATCATTGACAATCTCGACAATTCCGTTATGGAAGCGGTGGACCGGGTCAAGGACCTTGTGGGCCCTCAGCTTTCGCAGAACCTCGAATTCACCCTCGGTGATCTCAGGAATAAGGATGATTTGGAGAAACTCTTCTCCAAGACAAAGTTTGATGCTGTGATTCACTTTGCTGGGCTTAAAGCTGTTGGAGAAAGTGTTGCGAAGCCCCGCCGCTACTTTGATTTTAATTTGGTCGGAACCATCAATCTCTATGAAATTATGGCCAAGTATAATTGCAAAAAGATGGTTTTGTCATCATCTGCAACCGTTTATGGCCAACCTGAAAAGATACCCTGTGTGGAGGATTTCAAGTTACAAGCCATGAATCCTTATGGACGGACCAAGCTTTTCCTTGAAGAAATTGCACGAGATATCCAGAAAGCGGAGCCAGACTGGAGGATCATTTTACTGAGATACTTCAATCCAGTTGGGGCCCATGAAAGTGGTCGACTGGGTGAAGATCCCAGGGGCATCCCAAATAACCTCATGCCTTACATTCAGCAAGTAGCTGTTGGAAGGTTGCCTGAACTCAATGTATACGGTTATGATTATCCCACAAAGGATGGCTCTGCGGTACGGGACTATATCCATGTGATGGATTTAGCTGATGGTCACATTGCTGCCCTGCGAAAGCTTTTCACGGCAGAAAACATAGGTTGTACTGCTTACAACCTGGGAACTGGTCGAGGTACATCTGTGCTTGAAATGGTTGCGGCATTTGAAAAGGCTTCTGGCAAGAAAATTCCAGTGAAAAAGTGTCCAAGGAGACCGGGAGATGCTACTGAGGTTTATGCATCTACAGAGAAGGCTGAGAAGGAACTCGGTTGGAAGGCAAAATATGGCATAGAGGAAATGTGCAGGGACCAATGGAATTGGGCAAAGAACAACCCGTGGGGCTACCAGGGGAAGCCTTGA 1056 0.4773 MVSSSPQTILVTGGAGFIGTHTAVQLLKGGFRVSIIDNLDNSVMEAVDRVKDLVGPQLSQNLEFTLGDLRNKDDLEKLFSKTKFDAVIHFAGLKAVGESVAKPRRYFDFNLVGTINLYEIMAKYNCKKMVLSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFNPVGAHESGRLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGYDYPTKDGSAVRDYIHVMDLADGHIAALRKLFTAENIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPVKKCPRRPGDATEVYASTEKAEKELGWKAKYGIEEMCRDQWNWAKNNPWGYQGKP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2685 351 PRINTS Nucleotide sugar epimerase signature 306 323 - -
Dod04g2685 351 PRINTS Nucleotide sugar epimerase signature 267 282 - -
Dod04g2685 351 PRINTS Nucleotide sugar epimerase signature 240 255 - -
Dod04g2685 351 Gene3D - 9 280 - -
Dod04g2685 351 Gene3D - 198 340 - -
Dod04g2685 351 TIGRFAM galE: UDP-glucose 4-epimerase GalE 9 344 IPR005886 GO:0003978|GO:0006012
Dod04g2685 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 348 IPR036291 -
Dod04g2685 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 351 - -
Dod04g2685 351 Pfam GDP-mannose 4,6 dehydratase 10 335 IPR016040 -
Dod04g2685 351 CDD UDP_G4E_1_SDR_e 8 341 IPR005886 GO:0003978|GO:0006012
Dod04g2685 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2685 Dod-Chr4 50837897 50841112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2685 8 339 Miscellaneous Gene Families AT4G00110 26.225 1.68e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2685 K01784 - gmx:100803483 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2685 04 50837897 50841112 Dod04g2685 04 50837897 50841112 ECH